Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HPS1Q92902 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.23■□□□□ 0.19
HPS1Q92902 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HPS1Q92902 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.23■□□□□ 0.19
HPS1Q92902 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.23■□□□□ 0.19
HPS1Q92902 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS1Q92902 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HPS1Q92902 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS1Q92902 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HPS1Q92902 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS1Q92902 LINC00602-201ENST00000629776 2065 ntBASIC16.22■□□□□ 0.19
HPS1Q92902 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.22■□□□□ 0.19
HPS1Q92902 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HPS1Q92902 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
HPS1Q92902 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS1Q92902 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HPS1Q92902 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS1Q92902 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HPS1Q92902 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.22■□□□□ 0.19
HPS1Q92902 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.22■□□□□ 0.19
HPS1Q92902 AC011298.2-201ENST00000617989 482 ntBASIC16.22■□□□□ 0.19
HPS1Q92902 AC130371.2-201ENST00000619443 611 ntBASIC16.22■□□□□ 0.19
HPS1Q92902 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HPS1Q92902 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HPS1Q92902 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.22■□□□□ 0.19
HPS1Q92902 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HPS1Q92902 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS1Q92902 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HPS1Q92902 PCDHB17P-201ENST00000539533 2393 ntBASIC16.22■□□□□ 0.19
HPS1Q92902 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS1Q92902 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS1Q92902 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS1Q92902 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HPS1Q92902 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HPS1Q92902 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
HPS1Q92902 RCC2P6-201ENST00000526625 1557 ntBASIC16.21■□□□□ 0.19
HPS1Q92902 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS1Q92902 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 AC005052.1-201ENST00000625181 2492 ntBASIC16.21■□□□□ 0.19
HPS1Q92902 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.21■□□□□ 0.19
HPS1Q92902 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS1Q92902 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 CRYGFP-201ENST00000418459 633 ntBASIC16.21■□□□□ 0.19
HPS1Q92902 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.21■□□□□ 0.19
HPS1Q92902 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HPS1Q92902 TSPY21P-201ENST00000433481 731 ntBASIC16.21■□□□□ 0.19
HPS1Q92902 ATP5G1P1-201ENST00000448724 379 ntBASIC16.21■□□□□ 0.19
HPS1Q92902 AC011506.1-201ENST00000474329 610 ntBASIC16.21■□□□□ 0.19
HPS1Q92902 Z85996.1-201ENST00000494644 937 ntBASIC16.21■□□□□ 0.19
HPS1Q92902 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS1Q92902 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.21■□□□□ 0.19
HPS1Q92902 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HPS1Q92902 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS1Q92902 AP000692.2-201ENST00000608391 879 ntBASIC16.21■□□□□ 0.19
HPS1Q92902 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.21■□□□□ 0.19
HPS1Q92902 AC023824.1-201ENST00000562945 2975 ntBASIC16.21■□□□□ 0.19
HPS1Q92902 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
HPS1Q92902 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HPS1Q92902 PCDHA14-201ENST00000506751 2298 ntBASIC16.21■□□□□ 0.19
HPS1Q92902 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
HPS1Q92902 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HPS1Q92902 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.21■□□□□ 0.18
HPS1Q92902 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HPS1Q92902 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HPS1Q92902 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.2■□□□□ 0.18
HPS1Q92902 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.2■□□□□ 0.18
HPS1Q92902 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.2■□□□□ 0.18
HPS1Q92902 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HPS1Q92902 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HPS1Q92902 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.2■□□□□ 0.18
HPS1Q92902 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.2■□□□□ 0.18
HPS1Q92902 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.2■□□□□ 0.18
HPS1Q92902 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms