Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
DDX1Q92499 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 AP002383.4-201ENST00000442518 975 ntBASIC18.79■□□□□ 0.6
DDX1Q92499 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX1Q92499 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX1Q92499 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
DDX1Q92499 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 AL031008.1-201ENST00000619963 541 ntBASIC18.79■□□□□ 0.6
DDX1Q92499 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
DDX1Q92499 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DDX1Q92499 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX1Q92499 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.78■□□□□ 0.6
DDX1Q92499 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 AIRN-201ENST00000601203 4374 ntBASIC18.78■□□□□ 0.6
DDX1Q92499 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
DDX1Q92499 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX1Q92499 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX1Q92499 AC106795.1-205ENST00000512851 1056 ntBASIC18.78■□□□□ 0.6
DDX1Q92499 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.78■□□□□ 0.6
DDX1Q92499 AC019129.2-201ENST00000609837 1235 ntBASIC18.78■□□□□ 0.6
DDX1Q92499 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
DDX1Q92499 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDX1Q92499 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.78■□□□□ 0.6
DDX1Q92499 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX1Q92499 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
DDX1Q92499 FZD10-202ENST00000539839 3282 ntBASIC18.78■□□□□ 0.6
DDX1Q92499 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX1Q92499 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX1Q92499 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX1Q92499 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DDX1Q92499 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DDX1Q92499 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX1Q92499 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
DDX1Q92499 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX1Q92499 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.77■□□□□ 0.6
DDX1Q92499 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DDX1Q92499 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
DDX1Q92499 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DDX1Q92499 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.77■□□□□ 0.6
DDX1Q92499 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
DDX1Q92499 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.77■□□□□ 0.6
DDX1Q92499 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX1Q92499 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.77■□□□□ 0.6
DDX1Q92499 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.77■□□□□ 0.6
DDX1Q92499 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.77■□□□□ 0.6
DDX1Q92499 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX1Q92499 AC011840.4-201ENST00000578471 627 ntBASIC18.77■□□□□ 0.6
DDX1Q92499 AC104692.2-201ENST00000603054 253 ntBASIC18.77■□□□□ 0.6
DDX1Q92499 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX1Q92499 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.77■□□□□ 0.6
DDX1Q92499 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX1Q92499 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
DDX1Q92499 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX1Q92499 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DDX1Q92499 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.77■□□□□ 0.59
DDX1Q92499 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
DDX1Q92499 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DDX1Q92499 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DDX1Q92499 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX1Q92499 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX1Q92499 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX1Q92499 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
DDX1Q92499 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.76■□□□□ 0.59
DDX1Q92499 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms