Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 AC092647.4-201ENST00000457211 535 ntBASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 NEK4P2-201ENST00000580004 1012 ntBASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 MIR4674-201ENST00000582457 87 ntBASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 AC011558.1-201ENST00000623459 338 ntBASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40AQ8WXH6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 AL023284.2-201ENST00000405850 579 ntBASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 AC087388.1-201ENST00000571370 1112 ntBASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40AQ8WXH6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms