Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 MMP23A-201ENST00000234610 1017 ntBASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC44A1Q8WWI5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
SLC44A1Q8WWI5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.71■□□□□ 0.42
SLC44A1Q8WWI5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SLC44A1Q8WWI5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC44A1Q8WWI5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC44A1Q8WWI5 AL391807.1-203ENST00000604392 2365 ntBASIC17.71■□□□□ 0.42
SLC44A1Q8WWI5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC44A1Q8WWI5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 TSPY12P-201ENST00000421279 868 ntBASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 RASA4DP-201ENST00000460726 1199 ntBASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 AL136038.4-201ENST00000603606 1261 ntBASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 AL139327.4-201ENST00000612362 153 ntBASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 AC141257.4-201ENST00000634557 245 ntBASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 AC136944.6-201ENST00000634818 245 ntBASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 AC105020.1-201ENST00000435356 2205 ntBASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC44A1Q8WWI5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms