Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF139Q8WU17 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF139Q8WU17 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 FAM220CP-201ENST00000395253 831 ntBASIC18.57■□□□□ 0.56
RNF139Q8WU17 AC007967.3-201ENST00000434308 558 ntBASIC18.57■□□□□ 0.56
RNF139Q8WU17 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF139Q8WU17 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RNF139Q8WU17 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF139Q8WU17 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF139Q8WU17 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF139Q8WU17 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF139Q8WU17 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF139Q8WU17 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF139Q8WU17 AC134043.2-201ENST00000624206 2238 ntBASIC18.56■□□□□ 0.56
RNF139Q8WU17 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF139Q8WU17 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF139Q8WU17 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF139Q8WU17 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF139Q8WU17 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 AC012317.2-201ENST00000623305 2251 ntBASIC18.56■□□□□ 0.56
RNF139Q8WU17 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF139Q8WU17 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF139Q8WU17 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 UNC93B7-201ENST00000509439 705 ntBASIC18.55■□□□□ 0.56
RNF139Q8WU17 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.55■□□□□ 0.56
RNF139Q8WU17 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF139Q8WU17 AC006116.8-202ENST00000587620 1550 ntBASIC18.55■□□□□ 0.56
RNF139Q8WU17 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RNF139Q8WU17 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms