Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB3IL1Q8TBN0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB3IL1Q8TBN0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
RAB3IL1Q8TBN0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB3IL1Q8TBN0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 AC112497.1-201ENST00000624824 639 ntBASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 AP006294.2-201ENST00000641667 209 ntBASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IL1Q8TBN0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 DDX43P3-201ENST00000441064 443 ntBASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 AC097488.1-201ENST00000507834 756 ntBASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 CR769767.2-201ENST00000622735 460 ntBASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RAB3IL1Q8TBN0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 C1QBPP2-201ENST00000528754 825 ntBASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 REXO1L11P-201ENST00000620964 1927 ntBASIC17.62■□□□□ 0.41
RAB3IL1Q8TBN0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms