Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RDH13Q8NBN7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 AC096633.1-201ENST00000422446 749 ntBASIC19.35■□□□□ 0.69
RDH13Q8NBN7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 AC246785.2-201ENST00000432512 513 ntBASIC19.35■□□□□ 0.69
RDH13Q8NBN7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 DDX43P3-201ENST00000441064 443 ntBASIC19.35■□□□□ 0.69
RDH13Q8NBN7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 KRT17P6-201ENST00000453795 1220 ntBASIC19.35■□□□□ 0.69
RDH13Q8NBN7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 AC074051.2-201ENST00000565115 352 ntBASIC19.35■□□□□ 0.69
RDH13Q8NBN7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RDH13Q8NBN7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 AC007967.3-201ENST00000434308 558 ntBASIC19.34■□□□□ 0.69
RDH13Q8NBN7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 AL138831.2-201ENST00000606564 490 ntBASIC19.34■□□□□ 0.69
RDH13Q8NBN7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RDH13Q8NBN7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 AC097374.2-201ENST00000618617 1306 ntBASIC19.33■□□□□ 0.69
RDH13Q8NBN7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.33■□□□□ 0.69
RDH13Q8NBN7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 MINOS1P3-201ENST00000457048 203 ntBASIC19.33■□□□□ 0.68
RDH13Q8NBN7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 NSUN5P1-202ENST00000421140 1535 ntBASIC19.33■□□□□ 0.68
RDH13Q8NBN7 NSUN5P2-203ENST00000457352 1529 ntBASIC19.33■□□□□ 0.68
RDH13Q8NBN7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms