Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 AC108751.1-201ENST00000490852 363 ntBASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 AC136632.2-201ENST00000512891 861 ntBASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 AC064836.3-201ENST00000607928 673 ntBASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 AC073592.5-201ENST00000624854 528 ntBASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COLGALT1Q8NBJ5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 AC093010.1-201ENST00000473625 1624 ntBASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 PMS2P2-201ENST00000425039 1128 ntBASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 AC103564.2-201ENST00000432853 1299 ntBASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 AC134684.3-201ENST00000641758 218 ntBASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 AC079781.4-201ENST00000641908 219 ntBASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19■□□□□ 0.63
COLGALT1Q8NBJ5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 AL354751.1-201ENST00000412768 1863 ntBASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
COLGALT1Q8NBJ5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COLGALT1Q8NBJ5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COLGALT1Q8NBJ5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COLGALT1Q8NBJ5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COLGALT1Q8NBJ5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COLGALT1Q8NBJ5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COLGALT1Q8NBJ5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COLGALT1Q8NBJ5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms