Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 KRT16P4-201ENST00000453883 522 ntBASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 AC091607.1-201ENST00000490318 1060 ntBASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 AC114341.1-201ENST00000618070 349 ntBASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00304Q8N9R0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 FAM220CP-201ENST00000395253 831 ntBASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 AC125634.1-201ENST00000438758 1403 ntBASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 KRT18P31-201ENST00000506277 1292 ntBASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 FICD-205ENST00000552758 603 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 AC005336.2-201ENST00000593183 939 ntBASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 AL591684.3-201ENST00000605187 298 ntBASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 AL138831.2-201ENST00000606564 490 ntBASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00304Q8N9R0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms