Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 GPR32P1-201ENST00000601788 811 ntBASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 HYMAI.1-201ENST00000620949 238 ntBASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 DDX43P3-201ENST00000441064 443 ntBASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 RN7SL850P-201ENST00000579959 291 ntBASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 AC005332.3-201ENST00000589904 676 ntBASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 AL138688.1-201ENST00000624851 1594 ntBASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00346Q8IVM7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 RNF126P1-202ENST00000569893 925 ntBASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 Z83836.1-201ENST00000624605 1642 ntBASIC15.65■□□□□ 0.1
LINC00346Q8IVM7 SIRPAP1-201ENST00000448467 1770 ntBASIC15.64■□□□□ 0.1
LINC00346Q8IVM7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
LINC00346Q8IVM7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms