Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 SPDYE13P-201ENST00000445314 798 ntBASIC18.41■□□□□ 0.54
RFX6Q8HWS3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 AL671277.2-201ENST00000458060 996 ntBASIC18.41■□□□□ 0.54
RFX6Q8HWS3 AC068472.1-201ENST00000474589 881 ntBASIC18.41■□□□□ 0.54
RFX6Q8HWS3 DUX4L26-201ENST00000489078 1255 ntBASIC18.41■□□□□ 0.54
RFX6Q8HWS3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 AC083849.1-201ENST00000615227 514 ntBASIC18.41■□□□□ 0.54
RFX6Q8HWS3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.41■□□□□ 0.54
RFX6Q8HWS3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX6Q8HWS3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 TMPOP1-202ENST00000424642 1267 ntBASIC18.4■□□□□ 0.54
RFX6Q8HWS3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RFX6Q8HWS3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RFX6Q8HWS3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RFX6Q8HWS3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.39■□□□□ 0.54
RFX6Q8HWS3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.39■□□□□ 0.54
RFX6Q8HWS3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 LINC01238-205ENST00000567549 1107 ntBASIC18.39■□□□□ 0.53
RFX6Q8HWS3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX6Q8HWS3 BX276092.7-203ENST00000637198 1536 ntBASIC18.39■□□□□ 0.53
RFX6Q8HWS3 AC012313.1-201ENST00000593393 3059 ntBASIC18.38■□□□□ 0.53
RFX6Q8HWS3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms