Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 AC096633.1-201ENST00000422446 749 ntBASIC15.62■□□□□ 0.09
RTTNQ86VV8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.62■□□□□ 0.09
RTTNQ86VV8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTTNQ86VV8 FAM220CP-201ENST00000395253 831 ntBASIC15.62■□□□□ 0.09
RTTNQ86VV8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 CHCHD2P8-201ENST00000429873 447 ntBASIC15.62■□□□□ 0.09
RTTNQ86VV8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 AC092183.1-201ENST00000469884 875 ntBASIC15.62■□□□□ 0.09
RTTNQ86VV8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 AC092865.5-201ENST00000545435 363 ntBASIC15.62■□□□□ 0.09
RTTNQ86VV8 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.62■□□□□ 0.09
RTTNQ86VV8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.61■□□□□ 0.09
RTTNQ86VV8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.61■□□□□ 0.09
RTTNQ86VV8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.61■□□□□ 0.09
RTTNQ86VV8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.61■□□□□ 0.09
RTTNQ86VV8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.61■□□□□ 0.09
RTTNQ86VV8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.61■□□□□ 0.09
RTTNQ86VV8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 AL390719.2-201ENST00000606993 987 ntBASIC15.61■□□□□ 0.09
RTTNQ86VV8 AL031008.1-201ENST00000619963 541 ntBASIC15.61■□□□□ 0.09
RTTNQ86VV8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.61■□□□□ 0.09
RTTNQ86VV8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.61■□□□□ 0.09
RTTNQ86VV8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTTNQ86VV8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 AF228730.7-201ENST00000641842 219 ntBASIC15.6■□□□□ 0.09
RTTNQ86VV8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 MIR1233-2-201ENST00000408138 82 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms