Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC124067.4-201ENST00000519691 2379 ntBASIC11.73□□□□□ -0.53
SCXQ7RTU7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 EFTUD1P1-204ENST00000560401 1798 ntBASIC11.73□□□□□ -0.53
SCXQ7RTU7 RNF126P1-202ENST00000569893 925 ntBASIC11.73□□□□□ -0.53
SCXQ7RTU7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 Z83836.1-201ENST00000624605 1642 ntBASIC11.72□□□□□ -0.53
SCXQ7RTU7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 AC084018.2-201ENST00000613093 2607 ntBASIC11.72□□□□□ -0.53
SCXQ7RTU7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 AC111152.3-201ENST00000569699 673 ntBASIC11.72□□□□□ -0.53
SCXQ7RTU7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 AL161938.1-201ENST00000569833 2180 ntBASIC11.72□□□□□ -0.53
SCXQ7RTU7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCXQ7RTU7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SCXQ7RTU7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 AC068587.6-202ENST00000641839 5619 ntBASIC11.71□□□□□ -0.53
SCXQ7RTU7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms