Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 AC139887.4-201ENST00000607877 719 ntBASIC16.35■□□□□ 0.21
TUBA1AQ71U36 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.35■□□□□ 0.21
TUBA1AQ71U36 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 CICP6-201ENST00000457191 2729 ntBASIC16.34■□□□□ 0.21
TUBA1AQ71U36 AL109659.2-201ENST00000606809 1674 ntBASIC16.34■□□□□ 0.21
TUBA1AQ71U36 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 AC006011.2-201ENST00000621313 1158 ntBASIC16.34■□□□□ 0.21
TUBA1AQ71U36 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBA1AQ71U36 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TUBA1AQ71U36 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TUBA1AQ71U36 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TUBA1AQ71U36 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
TUBA1AQ71U36 AL357033.4-201ENST00000617703 1807 ntBASIC16.33■□□□□ 0.21
TUBA1AQ71U36 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TUBA1AQ71U36 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TUBA1AQ71U36 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.33■□□□□ 0.21
TUBA1AQ71U36 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.33■□□□□ 0.21
TUBA1AQ71U36 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TUBA1AQ71U36 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TUBA1AQ71U36 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TUBA1AQ71U36 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 AC104076.2-201ENST00000448912 469 ntBASIC16.33■□□□□ 0.2
TUBA1AQ71U36 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 AC103702.1-201ENST00000548801 2630 ntBASIC16.33■□□□□ 0.2
TUBA1AQ71U36 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 CROCCP1-201ENST00000426910 5675 ntBASIC16.33■□□□□ 0.2
TUBA1AQ71U36 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 AL138688.1-201ENST00000624851 1594 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms