Protein–RNA interactions for Protein: Q6ZST4

LCNL1, Lipocalin-like 1 protein, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1Q6ZST4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 AL356309.3-201ENST00000624132 1934 ntBASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 PCDHB18P-201ENST00000524813 2368 ntBASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 AC004870.1-201ENST00000315132 882 ntBASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 RCN1P2-201ENST00000398357 915 ntBASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCNL1Q6ZST4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 TP73-AS1-210ENST00000637775 1455 ntBASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 ABALON-201ENST00000629058 1903 ntBASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCNL1Q6ZST4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCNL1Q6ZST4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCNL1Q6ZST4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LCNL1Q6ZST4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms