Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 AL596257.1-201ENST00000641463 2694 ntBASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 HOMER2P1-201ENST00000455653 964 ntBASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 MIR3917-201ENST00000580971 93 ntBASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 MIR3180-4-201ENST00000582223 153 ntBASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RNF111Q6ZNA4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 AC063952.2-201ENST00000498792 1227 ntBASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 AC022616.7-201ENST00000525383 220 ntBASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF111Q6ZNA4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 STARP1-201ENST00000397973 869 ntBASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 AL359075.1-203ENST00000462729 1002 ntBASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 AC090340.1-201ENST00000620778 4980 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms