Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHISA2Q6UWI4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SHISA2Q6UWI4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SHISA2Q6UWI4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SHISA2Q6UWI4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SHISA2Q6UWI4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SHISA2Q6UWI4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.71□□□□□ -0.22
SHISA2Q6UWI4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SHISA2Q6UWI4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 MRPL20P1-201ENST00000400819 433 ntBASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 AC096633.1-201ENST00000422446 749 ntBASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 FAM58CP-201ENST00000435741 640 ntBASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 MIR4745-201ENST00000577608 62 ntBASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 AC004790.2-201ENST00000623588 572 ntBASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 AC006504.4-201ENST00000592118 1568 ntBASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHISA2Q6UWI4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 BCAR1-209ENST00000546196 1340 ntBASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 RNA5SP421-201ENST00000516864 134 ntBASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 AC096734.2-201ENST00000562054 433 ntBASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 AC138761.1-201ENST00000584393 385 ntBASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 AC004877.2-201ENST00000623941 599 ntBASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 AC007064.4-201ENST00000637740 555 ntBASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA2Q6UWI4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA2Q6UWI4 LINC01126-201ENST00000623515 1646 ntBASIC13.68□□□□□ -0.22
SHISA2Q6UWI4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms