Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MIR7706-201ENST00000613747 67 ntBASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 SIGLEC16-201ENST00000599858 1437 ntBASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 DDX43P3-201ENST00000441064 443 ntBASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 AC243591.1-201ENST00000452967 1364 ntBASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 MTDHP4-201ENST00000600287 670 ntBASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 AL353593.2-201ENST00000602529 1483 ntBASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 AL049840.3-201ENST00000602669 611 ntBASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 AC025062.2-201ENST00000605477 670 ntBASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3F3CQ6NXT2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 AL049757.1-201ENST00000616842 1596 ntBASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3F3CQ6NXT2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms