Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 AP002414.1-201ENST00000391405 1147 ntBASIC18.41■□□□□ 0.54
TPGS2Q68CL5 LINC00982-205ENST00000420957 435 ntBASIC18.41■□□□□ 0.54
TPGS2Q68CL5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 MIR4751-201ENST00000578027 74 ntBASIC18.41■□□□□ 0.54
TPGS2Q68CL5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 AC010327.4-202ENST00000591484 748 ntBASIC18.41■□□□□ 0.54
TPGS2Q68CL5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPGS2Q68CL5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.4■□□□□ 0.54
TPGS2Q68CL5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 AC112482.1-201ENST00000492080 688 ntBASIC18.4■□□□□ 0.54
TPGS2Q68CL5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 GGTLC5P-201ENST00000617623 998 ntBASIC18.4■□□□□ 0.54
TPGS2Q68CL5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPGS2Q68CL5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TPGS2Q68CL5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TPGS2Q68CL5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TPGS2Q68CL5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 AC004408.2-201ENST00000623613 2777 ntBASIC18.39■□□□□ 0.53
TPGS2Q68CL5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 AC023274.1-201ENST00000418278 595 ntBASIC18.39■□□□□ 0.53
TPGS2Q68CL5 ACTG1P4-201ENST00000425123 1122 ntBASIC18.39■□□□□ 0.53
TPGS2Q68CL5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 KRT18P2-201ENST00000447938 1258 ntBASIC18.39■□□□□ 0.53
TPGS2Q68CL5 HCG4B-203ENST00000450128 991 ntBASIC18.39■□□□□ 0.53
TPGS2Q68CL5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 AL691403.2-201ENST00000618460 490 ntBASIC18.39■□□□□ 0.53
TPGS2Q68CL5 AC055717.3-201ENST00000622967 595 ntBASIC18.39■□□□□ 0.53
TPGS2Q68CL5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 AC002310.6-201ENST00000624451 1377 ntBASIC18.39■□□□□ 0.53
TPGS2Q68CL5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.39■□□□□ 0.53
TPGS2Q68CL5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TPGS2Q68CL5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TPGS2Q68CL5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPGS2Q68CL5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TPGS2Q68CL5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPGS2Q68CL5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPGS2Q68CL5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
TPGS2Q68CL5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TPGS2Q68CL5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPGS2Q68CL5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms