Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 AL591424.1-201ENST00000442569 1213 ntBASIC18.66■□□□□ 0.58
VARS2Q5ST30 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 PGAM5P1-201ENST00000518923 814 ntBASIC18.66■□□□□ 0.58
VARS2Q5ST30 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 AL139424.1-201ENST00000607572 797 ntBASIC18.66■□□□□ 0.58
VARS2Q5ST30 AC004706.3-202ENST00000621574 984 ntBASIC18.66■□□□□ 0.58
VARS2Q5ST30 AC005593.1-201ENST00000624894 515 ntBASIC18.66■□□□□ 0.58
VARS2Q5ST30 PGM5P2-202ENST00000637225 1043 ntBASIC18.66■□□□□ 0.58
VARS2Q5ST30 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VARS2Q5ST30 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 STK19B-204ENST00000512515 211 ntBASIC18.65■□□□□ 0.58
VARS2Q5ST30 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 AL691403.2-201ENST00000618460 490 ntBASIC18.65■□□□□ 0.58
VARS2Q5ST30 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 AC138028.4-201ENST00000564984 1845 ntBASIC18.65■□□□□ 0.58
VARS2Q5ST30 NCF1C-201ENST00000438382 1427 ntBASIC18.65■□□□□ 0.58
VARS2Q5ST30 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VARS2Q5ST30 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.65■□□□□ 0.58
VARS2Q5ST30 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VARS2Q5ST30 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.64■□□□□ 0.58
VARS2Q5ST30 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VARS2Q5ST30 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VARS2Q5ST30 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.64■□□□□ 0.57
VARS2Q5ST30 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARS2Q5ST30 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARS2Q5ST30 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARS2Q5ST30 ELK2BP-201ENST00000415014 1224 ntBASIC18.64■□□□□ 0.57
VARS2Q5ST30 MTND4LP12-201ENST00000448237 295 ntBASIC18.64■□□□□ 0.57
VARS2Q5ST30 KRT18P3-201ENST00000451602 1288 ntBASIC18.64■□□□□ 0.57
VARS2Q5ST30 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
VARS2Q5ST30 AC002558.1-201ENST00000488906 803 ntBASIC18.64■□□□□ 0.57
VARS2Q5ST30 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARS2Q5ST30 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.64■□□□□ 0.57
VARS2Q5ST30 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARS2Q5ST30 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.64■□□□□ 0.57
VARS2Q5ST30 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARS2Q5ST30 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.64■□□□□ 0.57
VARS2Q5ST30 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARS2Q5ST30 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VARS2Q5ST30 AC006504.4-201ENST00000592118 1568 ntBASIC18.64■□□□□ 0.57
VARS2Q5ST30 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms