Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 TSPY6P-201ENST00000448518 926 ntBASIC16.15■□□□□ 0.18
RBM48Q5RL73 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
RBM48Q5RL73 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBM48Q5RL73 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.14■□□□□ 0.18
RBM48Q5RL73 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 KRT8P7-201ENST00000533003 1432 ntBASIC16.14■□□□□ 0.17
RBM48Q5RL73 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.14■□□□□ 0.17
RBM48Q5RL73 DDX43P3-201ENST00000441064 443 ntBASIC16.14■□□□□ 0.17
RBM48Q5RL73 KRT16P5-201ENST00000455284 522 ntBASIC16.14■□□□□ 0.17
RBM48Q5RL73 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 RARRES2P10-201ENST00000564312 460 ntBASIC16.14■□□□□ 0.17
RBM48Q5RL73 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 AC011298.2-201ENST00000617989 482 ntBASIC16.14■□□□□ 0.17
RBM48Q5RL73 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 AC009949.1-201ENST00000623048 1830 ntBASIC16.14■□□□□ 0.17
RBM48Q5RL73 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.14■□□□□ 0.17
RBM48Q5RL73 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBM48Q5RL73 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
RBM48Q5RL73 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
RBM48Q5RL73 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.13■□□□□ 0.17
RBM48Q5RL73 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.13■□□□□ 0.17
RBM48Q5RL73 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.13■□□□□ 0.17
RBM48Q5RL73 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 NIFKP9-201ENST00000419265 221 ntBASIC16.13■□□□□ 0.17
RBM48Q5RL73 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.13■□□□□ 0.17
RBM48Q5RL73 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.13■□□□□ 0.17
RBM48Q5RL73 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.13■□□□□ 0.17
RBM48Q5RL73 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.13■□□□□ 0.17
RBM48Q5RL73 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.13■□□□□ 0.17
RBM48Q5RL73 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.13■□□□□ 0.17
RBM48Q5RL73 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBM48Q5RL73 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms