Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.31■■□□□ 1
RFX7Q2KHR2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.31■■□□□ 1
RFX7Q2KHR2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.31■■□□□ 1
RFX7Q2KHR2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.31■■□□□ 1
RFX7Q2KHR2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.31■■□□□ 1
RFX7Q2KHR2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.31■■□□□ 1
RFX7Q2KHR2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RFX7Q2KHR2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.31■■□□□ 1
RFX7Q2KHR2 AL353593.2-201ENST00000602529 1483 ntBASIC21.31■■□□□ 1
RFX7Q2KHR2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.3■■□□□ 1
RFX7Q2KHR2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.3■■□□□ 1
RFX7Q2KHR2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.3■■□□□ 1
RFX7Q2KHR2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 AC103564.2-201ENST00000432853 1299 ntBASIC21.3■■□□□ 1
RFX7Q2KHR2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 AC012640.2-201ENST00000561606 901 ntBASIC21.3■■□□□ 1
RFX7Q2KHR2 AC145285.3-201ENST00000564603 959 ntBASIC21.3■■□□□ 1
RFX7Q2KHR2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.3■■□□□ 1
RFX7Q2KHR2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.3■■□□□ 1
RFX7Q2KHR2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RFX7Q2KHR2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
RFX7Q2KHR2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RFX7Q2KHR2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.3■■□□□ 1
RFX7Q2KHR2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RFX7Q2KHR2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 MYCLP1-201ENST00000372451 1075 ntBASIC21.29■■□□□ 1
RFX7Q2KHR2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.29■■□□□ 1
RFX7Q2KHR2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RFX7Q2KHR2 RPS2P1-201ENST00000434010 821 ntBASIC21.29■■□□□ 1
RFX7Q2KHR2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
RFX7Q2KHR2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RFX7Q2KHR2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.29■■□□□ 1
RFX7Q2KHR2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RFX7Q2KHR2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 AL356309.3-201ENST00000624132 1934 ntBASIC21.29■■□□□ 1
RFX7Q2KHR2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFX7Q2KHR2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.28■■□□□ 1
RFX7Q2KHR2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.28■■□□□ 1
RFX7Q2KHR2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.28■■□□□ 1
RFX7Q2KHR2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.28■■□□□ 1
RFX7Q2KHR2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.28■■□□□ 1
RFX7Q2KHR2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.28■■□□□ 1
RFX7Q2KHR2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RFX7Q2KHR2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.28■■□□□ 1
RFX7Q2KHR2 AL049757.1-201ENST00000616842 1596 ntBASIC21.28■■□□□ 1
RFX7Q2KHR2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 AC073592.4-201ENST00000623827 446 ntBASIC21.28■■□□□ 1
RFX7Q2KHR2 AC116407.3-201ENST00000623905 1129 ntBASIC21.28■■□□□ 1
RFX7Q2KHR2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX7Q2KHR2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RFX7Q2KHR2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.27■■□□□ 1
RFX7Q2KHR2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.27■■□□□ 1
RFX7Q2KHR2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFX7Q2KHR2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFX7Q2KHR2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.27■■□□□ 1
RFX7Q2KHR2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFX7Q2KHR2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms