Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MTCL1P1-201ENST00000446207 792 ntBASIC17.85■□□□□ 0.45
PRAMEP78395 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.85■□□□□ 0.45
PRAMEP78395 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.85■□□□□ 0.45
PRAMEP78395 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
PRAMEP78395 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.85■□□□□ 0.45
PRAMEP78395 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.85■□□□□ 0.45
PRAMEP78395 AL049597.2-201ENST00000565575 961 ntBASIC17.85■□□□□ 0.45
PRAMEP78395 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.85■□□□□ 0.45
PRAMEP78395 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.85■□□□□ 0.45
PRAMEP78395 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.85■□□□□ 0.45
PRAMEP78395 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.85■□□□□ 0.45
PRAMEP78395 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.85■□□□□ 0.45
PRAMEP78395 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PRAMEP78395 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PRAMEP78395 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEP78395 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PRAMEP78395 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PRAMEP78395 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEP78395 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEP78395 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.84■□□□□ 0.45
PRAMEP78395 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.84■□□□□ 0.45
PRAMEP78395 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.84■□□□□ 0.45
PRAMEP78395 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEP78395 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEP78395 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PRAMEP78395 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEP78395 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEP78395 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEP78395 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEP78395 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.83■□□□□ 0.45
PRAMEP78395 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEP78395 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.83■□□□□ 0.45
PRAMEP78395 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.83■□□□□ 0.45
PRAMEP78395 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEP78395 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEP78395 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.83■□□□□ 0.45
PRAMEP78395 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PRAMEP78395 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEP78395 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEP78395 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEP78395 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PRAMEP78395 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PRAMEP78395 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEP78395 AC068472.1-201ENST00000474589 881 ntBASIC17.83■□□□□ 0.44
PRAMEP78395 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEP78395 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEP78395 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEP78395 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEP78395 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PRAMEP78395 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEP78395 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PRAMEP78395 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PRAMEP78395 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEP78395 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEP78395 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEP78395 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEP78395 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEP78395 FAM210CP-201ENST00000445714 574 ntBASIC17.82■□□□□ 0.44
PRAMEP78395 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEP78395 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 AC133963.1-201ENST00000504166 1679 ntBASIC17.82■□□□□ 0.44
PRAMEP78395 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEP78395 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEP78395 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PRAMEP78395 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEP78395 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEP78395 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEP78395 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEP78395 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms