Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.83■□□□□ 0.77
TPM4P67936 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.83■□□□□ 0.77
TPM4P67936 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.83■□□□□ 0.77
TPM4P67936 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPM4P67936 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.83■□□□□ 0.77
TPM4P67936 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
TPM4P67936 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.83■□□□□ 0.76
TPM4P67936 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM4P67936 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.83■□□□□ 0.76
TPM4P67936 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM4P67936 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.83■□□□□ 0.76
TPM4P67936 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TPM4P67936 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM4P67936 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM4P67936 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM4P67936 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM4P67936 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TPM4P67936 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
TPM4P67936 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.82■□□□□ 0.76
TPM4P67936 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TPM4P67936 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.82■□□□□ 0.76
TPM4P67936 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.82■□□□□ 0.76
TPM4P67936 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.82■□□□□ 0.76
TPM4P67936 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.82■□□□□ 0.76
TPM4P67936 DDX43P3-201ENST00000441064 443 ntBASIC19.82■□□□□ 0.76
TPM4P67936 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.82■□□□□ 0.76
TPM4P67936 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TPM4P67936 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
TPM4P67936 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.82■□□□□ 0.76
TPM4P67936 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.82■□□□□ 0.76
TPM4P67936 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
TPM4P67936 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TPM4P67936 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TPM4P67936 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM4P67936 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TPM4P67936 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.81■□□□□ 0.76
TPM4P67936 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.81■□□□□ 0.76
TPM4P67936 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
TPM4P67936 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.81■□□□□ 0.76
TPM4P67936 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.81■□□□□ 0.76
TPM4P67936 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TPM4P67936 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.81■□□□□ 0.76
TPM4P67936 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TPM4P67936 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.81■□□□□ 0.76
TPM4P67936 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TPM4P67936 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.81■□□□□ 0.76
TPM4P67936 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.81■□□□□ 0.76
TPM4P67936 AC009949.1-201ENST00000623048 1830 ntBASIC19.81■□□□□ 0.76
TPM4P67936 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TPM4P67936 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.8■□□□□ 0.76
TPM4P67936 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 FLJ16779-201ENST00000612722 7638 ntBASIC19.8■□□□□ 0.76
TPM4P67936 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
TPM4P67936 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 ABHD17AP1-201ENST00000358206 933 ntBASIC19.8■□□□□ 0.76
TPM4P67936 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TPM4P67936 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.8■□□□□ 0.76
TPM4P67936 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.8■□□□□ 0.76
TPM4P67936 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.8■□□□□ 0.76
TPM4P67936 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms