Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CRYGFP-201ENST00000418459 633 ntBASIC16.18■□□□□ 0.18
CDC42P60953 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.18■□□□□ 0.18
CDC42P60953 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC42P60953 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC42P60953 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC42P60953 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC42P60953 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.18■□□□□ 0.18
CDC42P60953 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.18■□□□□ 0.18
CDC42P60953 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.18■□□□□ 0.18
CDC42P60953 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDC42P60953 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC42P60953 AGGF1P2-201ENST00000426656 2106 ntBASIC16.18■□□□□ 0.18
CDC42P60953 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC42P60953 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.17■□□□□ 0.18
CDC42P60953 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
CDC42P60953 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDC42P60953 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.17■□□□□ 0.18
CDC42P60953 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.17■□□□□ 0.18
CDC42P60953 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC42P60953 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CDC42P60953 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
CDC42P60953 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDC42P60953 DDX43P3-201ENST00000441064 443 ntBASIC16.17■□□□□ 0.18
CDC42P60953 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.17■□□□□ 0.18
CDC42P60953 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CDC42P60953 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.17■□□□□ 0.18
CDC42P60953 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.17■□□□□ 0.18
CDC42P60953 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CDC42P60953 AL135905.2-201ENST00000584934 1404 ntBASIC16.17■□□□□ 0.18
CDC42P60953 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
CDC42P60953 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDC42P60953 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC42P60953 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC42P60953 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC42P60953 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.17■□□□□ 0.18
CDC42P60953 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDC42P60953 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDC42P60953 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDC42P60953 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDC42P60953 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDC42P60953 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.16■□□□□ 0.18
CDC42P60953 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC42P60953 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.16■□□□□ 0.18
CDC42P60953 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 AP003041.3-201ENST00000527151 707 ntBASIC16.16■□□□□ 0.18
CDC42P60953 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC42P60953 AC010240.3-201ENST00000607688 395 ntBASIC16.16■□□□□ 0.18
CDC42P60953 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDC42P60953 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
CDC42P60953 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.16■□□□□ 0.18
CDC42P60953 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC42P60953 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC42P60953 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CDC42P60953 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CDC42P60953 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDC42P60953 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CDC42P60953 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.16■□□□□ 0.18
CDC42P60953 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC42P60953 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC42P60953 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDC42P60953 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDC42P60953 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms