Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AC122714.2-201ENST00000502787 707 ntBASIC17.21■□□□□ 0.35
AP1S2P56377 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.21■□□□□ 0.35
AP1S2P56377 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
AP1S2P56377 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.21■□□□□ 0.35
AP1S2P56377 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.21■□□□□ 0.35
AP1S2P56377 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
AP1S2P56377 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.21■□□□□ 0.35
AP1S2P56377 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
AP1S2P56377 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
AP1S2P56377 KRT18P1-202ENST00000452408 1331 ntBASIC17.21■□□□□ 0.34
AP1S2P56377 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
AP1S2P56377 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
AP1S2P56377 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.2■□□□□ 0.34
AP1S2P56377 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP1S2P56377 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
AP1S2P56377 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.2■□□□□ 0.34
AP1S2P56377 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.2■□□□□ 0.34
AP1S2P56377 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.2■□□□□ 0.34
AP1S2P56377 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.2■□□□□ 0.34
AP1S2P56377 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.2■□□□□ 0.34
AP1S2P56377 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.2■□□□□ 0.34
AP1S2P56377 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
AP1S2P56377 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.2■□□□□ 0.34
AP1S2P56377 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.2■□□□□ 0.34
AP1S2P56377 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.2■□□□□ 0.34
AP1S2P56377 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP1S2P56377 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.2■□□□□ 0.34
AP1S2P56377 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.2■□□□□ 0.34
AP1S2P56377 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.2■□□□□ 0.34
AP1S2P56377 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
AP1S2P56377 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.2■□□□□ 0.34
AP1S2P56377 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 AC020916.1-201ENST00000587762 1774 ntBASIC17.2■□□□□ 0.34
AP1S2P56377 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
AP1S2P56377 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S2P56377 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
AP1S2P56377 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.19■□□□□ 0.34
AP1S2P56377 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.19■□□□□ 0.34
AP1S2P56377 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.19■□□□□ 0.34
AP1S2P56377 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.19■□□□□ 0.34
AP1S2P56377 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
AP1S2P56377 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.19■□□□□ 0.34
AP1S2P56377 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 AC009533.2-201ENST00000543664 586 ntBASIC17.19■□□□□ 0.34
AP1S2P56377 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.19■□□□□ 0.34
AP1S2P56377 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
AP1S2P56377 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
AP1S2P56377 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.19■□□□□ 0.34
AP1S2P56377 Z69720.1-201ENST00000601483 472 ntBASIC17.19■□□□□ 0.34
AP1S2P56377 AL445228.2-201ENST00000605589 952 ntBASIC17.19■□□□□ 0.34
AP1S2P56377 AC010331.1-201ENST00000611423 582 ntBASIC17.19■□□□□ 0.34
AP1S2P56377 AL358472.4-201ENST00000633140 710 ntBASIC17.19■□□□□ 0.34
AP1S2P56377 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
AP1S2P56377 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.19■□□□□ 0.34
AP1S2P56377 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
AP1S2P56377 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.19■□□□□ 0.34
AP1S2P56377 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.19■□□□□ 0.34
AP1S2P56377 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.19■□□□□ 0.34
AP1S2P56377 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.19■□□□□ 0.34
AP1S2P56377 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S2P56377 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S2P56377 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms