Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 ATP5G2P1-201ENST00000433580 426 ntBASIC21.56■■□□□ 1.04
PDE1AP54750 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.56■■□□□ 1.04
PDE1AP54750 LINC00265-3P-201ENST00000447588 903 ntBASIC21.56■■□□□ 1.04
PDE1AP54750 KRT17P6-201ENST00000453795 1220 ntBASIC21.56■■□□□ 1.04
PDE1AP54750 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE1AP54750 AC009533.2-201ENST00000543664 586 ntBASIC21.56■■□□□ 1.04
PDE1AP54750 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
PDE1AP54750 AC011467.2-201ENST00000598425 242 ntBASIC21.56■■□□□ 1.04
PDE1AP54750 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PDE1AP54750 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.56■■□□□ 1.04
PDE1AP54750 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PDE1AP54750 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
PDE1AP54750 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
PDE1AP54750 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE1AP54750 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PDE1AP54750 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE1AP54750 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.55■■□□□ 1.04
PDE1AP54750 FAM220CP-201ENST00000395253 831 ntBASIC21.55■■□□□ 1.04
PDE1AP54750 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.55■■□□□ 1.04
PDE1AP54750 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE1AP54750 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.55■■□□□ 1.04
PDE1AP54750 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE1AP54750 AC109462.3-201ENST00000573934 613 ntBASIC21.55■■□□□ 1.04
PDE1AP54750 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE1AP54750 BNIP3P18-201ENST00000593976 575 ntBASIC21.55■■□□□ 1.04
PDE1AP54750 Z69720.1-201ENST00000601483 472 ntBASIC21.55■■□□□ 1.04
PDE1AP54750 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.55■■□□□ 1.04
PDE1AP54750 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE1AP54750 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE1AP54750 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE1AP54750 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE1AP54750 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE1AP54750 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.55■■□□□ 1.04
PDE1AP54750 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE1AP54750 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE1AP54750 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE1AP54750 NSUN5P1-202ENST00000421140 1535 ntBASIC21.55■■□□□ 1.04
PDE1AP54750 NSUN5P2-203ENST00000457352 1529 ntBASIC21.55■■□□□ 1.04
PDE1AP54750 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE1AP54750 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.54■■□□□ 1.04
PDE1AP54750 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PDE1AP54750 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDE1AP54750 TP73-AS1-210ENST00000637775 1455 ntBASIC21.54■■□□□ 1.04
PDE1AP54750 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE1AP54750 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE1AP54750 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE1AP54750 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PDE1AP54750 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PDE1AP54750 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDE1AP54750 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.54■■□□□ 1.04
PDE1AP54750 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE1AP54750 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.54■■□□□ 1.04
PDE1AP54750 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.54■■□□□ 1.04
PDE1AP54750 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE1AP54750 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDE1AP54750 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PDE1AP54750 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
PDE1AP54750 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE1AP54750 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE1AP54750 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PDE1AP54750 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE1AP54750 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE1AP54750 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDE1AP54750 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PDE1AP54750 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PDE1AP54750 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDE1AP54750 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.53■■□□□ 1.04
PDE1AP54750 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PDE1AP54750 AC092119.3-201ENST00000612618 583 ntBASIC21.53■■□□□ 1.04
PDE1AP54750 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.53■■□□□ 1.04
PDE1AP54750 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE1AP54750 KRT8P10-201ENST00000450021 1447 ntBASIC21.53■■□□□ 1.04
PDE1AP54750 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms