Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
USP11P51784 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
USP11P51784 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.95■□□□□ 0.78
USP11P51784 AL121912.1-201ENST00000603683 238 ntBASIC19.95■□□□□ 0.78
USP11P51784 AC073592.4-201ENST00000623827 446 ntBASIC19.95■□□□□ 0.78
USP11P51784 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.95■□□□□ 0.78
USP11P51784 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP11P51784 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP11P51784 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
USP11P51784 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.95■□□□□ 0.78
USP11P51784 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP11P51784 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP11P51784 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 SIGLEC16-201ENST00000599858 1437 ntBASIC19.94■□□□□ 0.78
USP11P51784 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
USP11P51784 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.94■□□□□ 0.78
USP11P51784 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
USP11P51784 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.94■□□□□ 0.78
USP11P51784 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.94■□□□□ 0.78
USP11P51784 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.94■□□□□ 0.78
USP11P51784 AC079776.2-201ENST00000641154 1609 ntBASIC19.94■□□□□ 0.78
USP11P51784 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP11P51784 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.94■□□□□ 0.78
USP11P51784 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.94■□□□□ 0.78
USP11P51784 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
USP11P51784 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.93■□□□□ 0.78
USP11P51784 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 PCDHB18P-201ENST00000524813 2368 ntBASIC19.93■□□□□ 0.78
USP11P51784 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP11P51784 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 AC003669.1-201ENST00000334569 611 ntBASIC19.93■□□□□ 0.78
USP11P51784 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.93■□□□□ 0.78
USP11P51784 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
USP11P51784 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
USP11P51784 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.93■□□□□ 0.78
USP11P51784 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.93■□□□□ 0.78
USP11P51784 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.93■□□□□ 0.78
USP11P51784 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
USP11P51784 AC104692.2-201ENST00000603054 253 ntBASIC19.93■□□□□ 0.78
USP11P51784 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.93■□□□□ 0.78
USP11P51784 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.93■□□□□ 0.78
USP11P51784 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP11P51784 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
USP11P51784 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
USP11P51784 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
USP11P51784 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.92■□□□□ 0.78
USP11P51784 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.92■□□□□ 0.78
USP11P51784 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.92■□□□□ 0.78
USP11P51784 SPDYE21P-201ENST00000413323 827 ntBASIC19.92■□□□□ 0.78
USP11P51784 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 PRYP5-201ENST00000451909 266 ntBASIC19.92■□□□□ 0.78
USP11P51784 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.92■□□□□ 0.78
USP11P51784 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.92■□□□□ 0.78
USP11P51784 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.92■□□□□ 0.78
USP11P51784 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.92■□□□□ 0.78
USP11P51784 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.92■□□□□ 0.78
USP11P51784 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.92■□□□□ 0.78
USP11P51784 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
USP11P51784 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 AL356309.3-201ENST00000624132 1934 ntBASIC19.92■□□□□ 0.78
USP11P51784 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP11P51784 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms