Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRA4P48169 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
GABRA4P48169 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 NEFHP1-201ENST00000412845 2629 ntBASIC16.72■□□□□ 0.27
GABRA4P48169 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.72■□□□□ 0.27
GABRA4P48169 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GABRA4P48169 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.72■□□□□ 0.27
GABRA4P48169 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.72■□□□□ 0.27
GABRA4P48169 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.72■□□□□ 0.27
GABRA4P48169 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GABRA4P48169 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.72■□□□□ 0.27
GABRA4P48169 AL022342.1-201ENST00000400363 863 ntBASIC16.72■□□□□ 0.27
GABRA4P48169 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.72■□□□□ 0.27
GABRA4P48169 KLF4P1-201ENST00000412782 1185 ntBASIC16.72■□□□□ 0.27
GABRA4P48169 AL590627.1-203ENST00000421194 1026 ntBASIC16.72■□□□□ 0.27
GABRA4P48169 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.72■□□□□ 0.27
GABRA4P48169 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.72■□□□□ 0.27
GABRA4P48169 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.72■□□□□ 0.27
GABRA4P48169 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.72■□□□□ 0.27
GABRA4P48169 AC139887.3-201ENST00000568585 713 ntBASIC16.72■□□□□ 0.27
GABRA4P48169 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.72■□□□□ 0.27
GABRA4P48169 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
GABRA4P48169 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.72■□□□□ 0.27
GABRA4P48169 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.72■□□□□ 0.27
GABRA4P48169 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.72■□□□□ 0.27
GABRA4P48169 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.72■□□□□ 0.27
GABRA4P48169 AC116407.3-201ENST00000623905 1129 ntBASIC16.72■□□□□ 0.27
GABRA4P48169 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.72■□□□□ 0.27
GABRA4P48169 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 AL390961.4-201ENST00000623958 2535 ntBASIC16.72■□□□□ 0.27
GABRA4P48169 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.72■□□□□ 0.27
GABRA4P48169 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GABRA4P48169 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GABRA4P48169 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GABRA4P48169 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABRA4P48169 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GABRA4P48169 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
GABRA4P48169 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GABRA4P48169 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GABRA4P48169 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
GABRA4P48169 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GABRA4P48169 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 LAGE3P1-201ENST00000425356 484 ntBASIC16.71■□□□□ 0.27
GABRA4P48169 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.71■□□□□ 0.27
GABRA4P48169 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.71■□□□□ 0.27
GABRA4P48169 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GABRA4P48169 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.71■□□□□ 0.27
GABRA4P48169 IGHV3-52-201ENST00000519770 353 ntBASIC16.71■□□□□ 0.27
GABRA4P48169 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GABRA4P48169 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.71■□□□□ 0.27
GABRA4P48169 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.71■□□□□ 0.27
GABRA4P48169 AC120114.3-201ENST00000611923 658 ntBASIC16.71■□□□□ 0.27
GABRA4P48169 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.71■□□□□ 0.27
GABRA4P48169 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
GABRA4P48169 AC008735.5-201ENST00000623544 497 ntBASIC16.71■□□□□ 0.27
GABRA4P48169 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.71■□□□□ 0.27
GABRA4P48169 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABRA4P48169 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
GABRA4P48169 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
GABRA4P48169 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
GABRA4P48169 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABRA4P48169 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABRA4P48169 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABRA4P48169 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABRA4P48169 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.7■□□□□ 0.26
GABRA4P48169 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABRA4P48169 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GABRA4P48169 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.7■□□□□ 0.26
GABRA4P48169 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.7■□□□□ 0.26
GABRA4P48169 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.7■□□□□ 0.26
GABRA4P48169 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
GABRA4P48169 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GABRA4P48169 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABRA4P48169 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABRA4P48169 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms