Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
MDH1P40925 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
MDH1P40925 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
MDH1P40925 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.77■□□□□ 0.44
MDH1P40925 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.77■□□□□ 0.44
MDH1P40925 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
MDH1P40925 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MDH1P40925 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.77■□□□□ 0.44
MDH1P40925 AC008040.2-201ENST00000461049 708 ntBASIC17.77■□□□□ 0.44
MDH1P40925 RARRES2P10-201ENST00000564312 460 ntBASIC17.77■□□□□ 0.44
MDH1P40925 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
MDH1P40925 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.77■□□□□ 0.44
MDH1P40925 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
MDH1P40925 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.77■□□□□ 0.44
MDH1P40925 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
MDH1P40925 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
MDH1P40925 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.77■□□□□ 0.44
MDH1P40925 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MDH1P40925 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MDH1P40925 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.77■□□□□ 0.43
MDH1P40925 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
MDH1P40925 LYSMD4-203ENST00000378904 2122 ntBASIC17.77■□□□□ 0.43
MDH1P40925 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MDH1P40925 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
MDH1P40925 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MDH1P40925 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MDH1P40925 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MDH1P40925 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MDH1P40925 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
MDH1P40925 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MDH1P40925 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
MDH1P40925 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
MDH1P40925 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
MDH1P40925 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
MDH1P40925 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MDH1P40925 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 LINC02012-201ENST00000608206 1725 ntBASIC17.76■□□□□ 0.43
MDH1P40925 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 HOXB1-202ENST00000577092 1414 ntBASIC17.76■□□□□ 0.43
MDH1P40925 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.76■□□□□ 0.43
MDH1P40925 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.76■□□□□ 0.43
MDH1P40925 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.76■□□□□ 0.43
MDH1P40925 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.76■□□□□ 0.43
MDH1P40925 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.76■□□□□ 0.43
MDH1P40925 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.76■□□□□ 0.43
MDH1P40925 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.76■□□□□ 0.43
MDH1P40925 MIR3180-5-201ENST00000583743 153 ntBASIC17.76■□□□□ 0.43
MDH1P40925 PAUPAR-201ENST00000630360 2965 ntBASIC17.76■□□□□ 0.43
MDH1P40925 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.76■□□□□ 0.43
MDH1P40925 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.76■□□□□ 0.43
MDH1P40925 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
MDH1P40925 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
MDH1P40925 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
MDH1P40925 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MDH1P40925 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MDH1P40925 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.75■□□□□ 0.43
MDH1P40925 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.75■□□□□ 0.43
MDH1P40925 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 AC005052.1-201ENST00000625181 2492 ntBASIC17.75■□□□□ 0.43
MDH1P40925 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.75■□□□□ 0.43
MDH1P40925 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.75■□□□□ 0.43
MDH1P40925 AC011298.2-201ENST00000617989 482 ntBASIC17.75■□□□□ 0.43
MDH1P40925 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
MDH1P40925 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
MDH1P40925 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms