Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
RXRBP28702 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC22.89■■□□□ 1.25
RXRBP28702 COX11-210ENST00000639671 696 ntBASIC22.89■■□□□ 1.25
RXRBP28702 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RXRBP28702 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RXRBP28702 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC22.88■■□□□ 1.25
RXRBP28702 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
RXRBP28702 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
RXRBP28702 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.88■■□□□ 1.25
RXRBP28702 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC22.88■■□□□ 1.25
RXRBP28702 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC22.88■■□□□ 1.25
RXRBP28702 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC22.88■■□□□ 1.25
RXRBP28702 AP005482.1-201ENST00000563722 1273 ntBASIC22.88■■□□□ 1.25
RXRBP28702 SPDYE12P-201ENST00000618416 771 ntBASIC22.88■■□□□ 1.25
RXRBP28702 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RXRBP28702 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RXRBP28702 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.88■■□□□ 1.25
RXRBP28702 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
RXRBP28702 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RXRBP28702 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RXRBP28702 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
RXRBP28702 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC22.87■■□□□ 1.25
RXRBP28702 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.87■■□□□ 1.25
RXRBP28702 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RXRBP28702 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC22.87■■□□□ 1.25
RXRBP28702 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RXRBP28702 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC22.87■■□□□ 1.25
RXRBP28702 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.87■■□□□ 1.25
RXRBP28702 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC22.87■■□□□ 1.25
RXRBP28702 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC22.87■■□□□ 1.25
RXRBP28702 SLC25A6P2-201ENST00000497974 877 ntBASIC22.87■■□□□ 1.25
RXRBP28702 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC22.87■■□□□ 1.25
RXRBP28702 CD74-212ENST00000524315 584 ntTSL 5 BASIC22.87■■□□□ 1.25
RXRBP28702 AL138828.2-201ENST00000615812 383 ntBASIC22.87■■□□□ 1.25
RXRBP28702 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RXRBP28702 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RXRBP28702 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RXRBP28702 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RXRBP28702 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RXRBP28702 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RXRBP28702 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RXRBP28702 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.86■■□□□ 1.25
RXRBP28702 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RXRBP28702 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RXRBP28702 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.86■■□□□ 1.25
RXRBP28702 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
RXRBP28702 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RXRBP28702 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
RXRBP28702 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RXRBP28702 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC22.86■■□□□ 1.25
RXRBP28702 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
RXRBP28702 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.86■■□□□ 1.25
RXRBP28702 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RXRBP28702 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC22.86■■□□□ 1.25
RXRBP28702 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RXRBP28702 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC22.86■■□□□ 1.25
RXRBP28702 ACTBP11-201ENST00000436287 1126 ntBASIC22.86■■□□□ 1.25
RXRBP28702 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC22.86■■□□□ 1.25
RXRBP28702 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC22.86■■□□□ 1.25
RXRBP28702 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC22.86■■□□□ 1.25
RXRBP28702 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC22.86■■□□□ 1.25
RXRBP28702 AC009477.1-201ENST00000452936 217 ntBASIC22.86■■□□□ 1.25
RXRBP28702 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC22.86■■□□□ 1.25
RXRBP28702 TPI1-206ENST00000488464 791 ntTSL 5 BASIC22.86■■□□□ 1.25
RXRBP28702 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC22.86■■□□□ 1.25
RXRBP28702 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.86■■□□□ 1.25
RXRBP28702 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RXRBP28702 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC22.86■■□□□ 1.25
RXRBP28702 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RXRBP28702 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.86■■□□□ 1.25
RXRBP28702 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC22.86■■□□□ 1.25
RXRBP28702 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RXRBP28702 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RXRBP28702 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RXRBP28702 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
RXRBP28702 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.86■■□□□ 1.25
RXRBP28702 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.86■■□□□ 1.25
RXRBP28702 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RXRBP28702 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RXRBP28702 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
RXRBP28702 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
RXRBP28702 GRAMD4P3-201ENST00000621665 1669 ntBASIC22.85■■□□□ 1.25
RXRBP28702 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
RXRBP28702 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RXRBP28702 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
RXRBP28702 KRT223P-202ENST00000449164 1292 ntBASIC22.85■■□□□ 1.25
RXRBP28702 STOM-203ENST00000538954 1257 ntTSL 5 BASIC22.85■■□□□ 1.25
RXRBP28702 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.85■■□□□ 1.25
RXRBP28702 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms