Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.58■□□□□ 0.56
MMP8P22894 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
MMP8P22894 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP8P22894 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP8P22894 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
MMP8P22894 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.57■□□□□ 0.56
MMP8P22894 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.57■□□□□ 0.56
MMP8P22894 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP8P22894 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP8P22894 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.57■□□□□ 0.56
MMP8P22894 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
MMP8P22894 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP8P22894 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP8P22894 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.57■□□□□ 0.56
MMP8P22894 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.57■□□□□ 0.56
MMP8P22894 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.57■□□□□ 0.56
MMP8P22894 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
MMP8P22894 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP8P22894 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP8P22894 AC011467.2-201ENST00000598425 242 ntBASIC18.57■□□□□ 0.56
MMP8P22894 Z69720.1-201ENST00000601483 472 ntBASIC18.57■□□□□ 0.56
MMP8P22894 AC069148.1-201ENST00000608741 768 ntBASIC18.57■□□□□ 0.56
MMP8P22894 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.57■□□□□ 0.56
MMP8P22894 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP8P22894 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP8P22894 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP8P22894 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.57■□□□□ 0.56
MMP8P22894 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
MMP8P22894 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MMP8P22894 LTB4R2-202ENST00000528054 3092 ntBASIC18.57■□□□□ 0.56
MMP8P22894 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
MMP8P22894 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP8P22894 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.57■□□□□ 0.56
MMP8P22894 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.56■□□□□ 0.56
MMP8P22894 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.56■□□□□ 0.56
MMP8P22894 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MMP8P22894 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MMP8P22894 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.56■□□□□ 0.56
MMP8P22894 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MMP8P22894 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
MMP8P22894 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.56■□□□□ 0.56
MMP8P22894 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MMP8P22894 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.56■□□□□ 0.56
MMP8P22894 KRT17P6-201ENST00000453795 1220 ntBASIC18.56■□□□□ 0.56
MMP8P22894 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.56■□□□□ 0.56
MMP8P22894 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.56■□□□□ 0.56
MMP8P22894 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.56■□□□□ 0.56
MMP8P22894 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.56■□□□□ 0.56
MMP8P22894 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MMP8P22894 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MMP8P22894 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
MMP8P22894 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.56■□□□□ 0.56
MMP8P22894 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP8P22894 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.55■□□□□ 0.56
MMP8P22894 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.55■□□□□ 0.56
MMP8P22894 AC020916.1-201ENST00000587762 1774 ntBASIC18.55■□□□□ 0.56
MMP8P22894 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
MMP8P22894 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MMP8P22894 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.55■□□□□ 0.56
MMP8P22894 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
MMP8P22894 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP8P22894 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
MMP8P22894 IGHV3-47-201ENST00000425060 335 ntBASIC18.55■□□□□ 0.56
MMP8P22894 AC103564.2-201ENST00000432853 1299 ntBASIC18.55■□□□□ 0.56
MMP8P22894 ATP5G2P1-201ENST00000433580 426 ntBASIC18.55■□□□□ 0.56
MMP8P22894 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.55■□□□□ 0.56
MMP8P22894 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.55■□□□□ 0.56
MMP8P22894 AC109462.3-201ENST00000573934 613 ntBASIC18.55■□□□□ 0.56
MMP8P22894 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.55■□□□□ 0.56
MMP8P22894 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
MMP8P22894 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
MMP8P22894 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms