Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 KRT18P67-201ENST00000432816 1264 ntBASIC19.4■□□□□ 0.7
ITGA4P13612 FGFR3P6-201ENST00000457012 610 ntBASIC19.4■□□□□ 0.7
ITGA4P13612 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.4■□□□□ 0.7
ITGA4P13612 AP001005.1-201ENST00000571755 1248 ntBASIC19.4■□□□□ 0.7
ITGA4P13612 AL773604.1-201ENST00000617417 272 ntBASIC19.4■□□□□ 0.7
ITGA4P13612 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ITGA4P13612 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.4■□□□□ 0.7
ITGA4P13612 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITGA4P13612 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.4■□□□□ 0.7
ITGA4P13612 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
ITGA4P13612 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
ITGA4P13612 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ITGA4P13612 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ITGA4P13612 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 REXO1L9P-201ENST00000604264 2108 ntBASIC19.39■□□□□ 0.69
ITGA4P13612 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGA4P13612 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.39■□□□□ 0.69
ITGA4P13612 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGA4P13612 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.39■□□□□ 0.69
ITGA4P13612 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGA4P13612 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.39■□□□□ 0.69
ITGA4P13612 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGA4P13612 ABCD1P5-201ENST00000445663 754 ntBASIC19.39■□□□□ 0.69
ITGA4P13612 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGA4P13612 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.39■□□□□ 0.69
ITGA4P13612 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.39■□□□□ 0.69
ITGA4P13612 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.39■□□□□ 0.69
ITGA4P13612 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGA4P13612 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 AC020916.1-201ENST00000587762 1774 ntBASIC19.39■□□□□ 0.69
ITGA4P13612 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITGA4P13612 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.39■□□□□ 0.69
ITGA4P13612 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.38■□□□□ 0.69
ITGA4P13612 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ITGA4P13612 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
ITGA4P13612 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.38■□□□□ 0.69
ITGA4P13612 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.38■□□□□ 0.69
ITGA4P13612 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 AL022342.1-201ENST00000400363 863 ntBASIC19.38■□□□□ 0.69
ITGA4P13612 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.38■□□□□ 0.69
ITGA4P13612 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.38■□□□□ 0.69
ITGA4P13612 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.38■□□□□ 0.69
ITGA4P13612 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 SCARNA2-201ENST00000458748 420 ntBASIC19.38■□□□□ 0.69
ITGA4P13612 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.38■□□□□ 0.69
ITGA4P13612 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.38■□□□□ 0.69
ITGA4P13612 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.38■□□□□ 0.69
ITGA4P13612 AP005117.1-201ENST00000584346 1413 ntBASIC19.38■□□□□ 0.69
ITGA4P13612 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.38■□□□□ 0.69
ITGA4P13612 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.38■□□□□ 0.69
ITGA4P13612 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.38■□□□□ 0.69
ITGA4P13612 AC022898.2-201ENST00000616822 1312 ntBASIC19.38■□□□□ 0.69
ITGA4P13612 AC097374.2-201ENST00000618617 1306 ntBASIC19.38■□□□□ 0.69
ITGA4P13612 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ITGA4P13612 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITGA4P13612 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA4P13612 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA4P13612 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA4P13612 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA4P13612 AC138028.4-201ENST00000564984 1845 ntBASIC19.37■□□□□ 0.69
ITGA4P13612 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA4P13612 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA4P13612 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ITGA4P13612 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA4P13612 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ITGA4P13612 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.37■□□□□ 0.69
ITGA4P13612 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA4P13612 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA4P13612 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms