Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP3P12645 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
BMP3P12645 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP3P12645 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.33■□□□□ 0.85
BMP3P12645 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP3P12645 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP3P12645 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.33■□□□□ 0.85
BMP3P12645 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP3P12645 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.33■□□□□ 0.85
BMP3P12645 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP3P12645 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BMP3P12645 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP3P12645 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.33■□□□□ 0.85
BMP3P12645 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
BMP3P12645 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP3P12645 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.33■□□□□ 0.85
BMP3P12645 MYCLP1-201ENST00000372451 1075 ntBASIC20.33■□□□□ 0.85
BMP3P12645 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP3P12645 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.33■□□□□ 0.85
BMP3P12645 AC005104.2-201ENST00000427818 678 ntBASIC20.33■□□□□ 0.85
BMP3P12645 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
BMP3P12645 AC136632.2-201ENST00000512891 861 ntBASIC20.33■□□□□ 0.85
BMP3P12645 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.33■□□□□ 0.85
BMP3P12645 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.33■□□□□ 0.85
BMP3P12645 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.33■□□□□ 0.85
BMP3P12645 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP3P12645 PGM5P2-202ENST00000637225 1043 ntBASIC20.33■□□□□ 0.85
BMP3P12645 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
BMP3P12645 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
BMP3P12645 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BMP3P12645 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
BMP3P12645 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.33■□□□□ 0.84
BMP3P12645 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BMP3P12645 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
BMP3P12645 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BMP3P12645 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
BMP3P12645 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
BMP3P12645 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.32■□□□□ 0.84
BMP3P12645 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.32■□□□□ 0.84
BMP3P12645 PMS2P7-201ENST00000506558 1336 ntBASIC20.32■□□□□ 0.84
BMP3P12645 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
BMP3P12645 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
BMP3P12645 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.32■□□□□ 0.84
BMP3P12645 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.32■□□□□ 0.84
BMP3P12645 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.32■□□□□ 0.84
BMP3P12645 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.32■□□□□ 0.84
BMP3P12645 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
BMP3P12645 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.32■□□□□ 0.84
BMP3P12645 AC027601.4-201ENST00000611259 610 ntBASIC20.32■□□□□ 0.84
BMP3P12645 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
BMP3P12645 AC005593.1-201ENST00000624894 515 ntBASIC20.32■□□□□ 0.84
BMP3P12645 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
BMP3P12645 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
BMP3P12645 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
BMP3P12645 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.32■□□□□ 0.84
BMP3P12645 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.32■□□□□ 0.84
BMP3P12645 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.32■□□□□ 0.84
BMP3P12645 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BMP3P12645 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
BMP3P12645 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BMP3P12645 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.31■□□□□ 0.84
BMP3P12645 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BMP3P12645 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BMP3P12645 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
BMP3P12645 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.31■□□□□ 0.84
BMP3P12645 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.31■□□□□ 0.84
BMP3P12645 AC009947.1-201ENST00000444350 727 ntBASIC20.31■□□□□ 0.84
BMP3P12645 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.31■□□□□ 0.84
BMP3P12645 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.31■□□□□ 0.84
BMP3P12645 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.31■□□□□ 0.84
BMP3P12645 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
BMP3P12645 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.31■□□□□ 0.84
BMP3P12645 AC140113.2-201ENST00000604370 208 ntBASIC20.31■□□□□ 0.84
BMP3P12645 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BMP3P12645 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.31■□□□□ 0.84
BMP3P12645 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
BMP3P12645 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BMP3P12645 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
BMP3P12645 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.31■□□□□ 0.84
BMP3P12645 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BMP3P12645 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.31■□□□□ 0.84
BMP3P12645 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.31■□□□□ 0.84
BMP3P12645 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BMP3P12645 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BMP3P12645 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
BMP3P12645 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
BMP3P12645 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
BMP3P12645 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms