Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ROS1P08922 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ROS1P08922 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ROS1P08922 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ROS1P08922 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ROS1P08922 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.21■□□□□ 0.02
ROS1P08922 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.21■□□□□ 0.02
ROS1P08922 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.21■□□□□ 0.02
ROS1P08922 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
ROS1P08922 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.21■□□□□ 0.02
ROS1P08922 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ROS1P08922 AL139424.1-201ENST00000607572 797 ntBASIC15.21■□□□□ 0.02
ROS1P08922 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.21■□□□□ 0.02
ROS1P08922 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.21■□□□□ 0.02
ROS1P08922 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.21■□□□□ 0.02
ROS1P08922 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.21■□□□□ 0.02
ROS1P08922 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ROS1P08922 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ROS1P08922 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 ZNF259P1-201ENST00000407656 1365 ntBASIC15.2■□□□□ 0.02
ROS1P08922 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.2■□□□□ 0.02
ROS1P08922 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ROS1P08922 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.2■□□□□ 0.02
ROS1P08922 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.2■□□□□ 0.02
ROS1P08922 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 AC148477.5-201ENST00000625164 1645 ntBASIC15.2■□□□□ 0.02
ROS1P08922 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ROS1P08922 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ROS1P08922 AL591424.1-201ENST00000442569 1213 ntBASIC15.2■□□□□ 0.02
ROS1P08922 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.2■□□□□ 0.02
ROS1P08922 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.2■□□□□ 0.02
ROS1P08922 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.2■□□□□ 0.02
ROS1P08922 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.2■□□□□ 0.02
ROS1P08922 AL020996.1-203ENST00000536896 2307 ntBASIC15.2■□□□□ 0.02
ROS1P08922 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.2■□□□□ 0.02
ROS1P08922 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.2■□□□□ 0.02
ROS1P08922 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ROS1P08922 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.2■□□□□ 0.02
ROS1P08922 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.2■□□□□ 0.02
ROS1P08922 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.2■□□□□ 0.02
ROS1P08922 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.2■□□□□ 0.02
ROS1P08922 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.2■□□□□ 0.02
ROS1P08922 HMGN1P19-201ENST00000436976 333 ntBASIC15.2■□□□□ 0.02
ROS1P08922 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ROS1P08922 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.2■□□□□ 0.02
ROS1P08922 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ROS1P08922 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.2■□□□□ 0.02
ROS1P08922 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.2■□□□□ 0.02
ROS1P08922 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.2■□□□□ 0.02
ROS1P08922 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.19■□□□□ 0.02
ROS1P08922 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.19■□□□□ 0.02
ROS1P08922 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ROS1P08922 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.19■□□□□ 0.02
ROS1P08922 AC009113.1-201ENST00000570267 2443 ntBASIC15.19■□□□□ 0.02
ROS1P08922 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 REXO1L9P-201ENST00000604264 2108 ntBASIC15.19■□□□□ 0.02
ROS1P08922 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
ROS1P08922 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ROS1P08922 AC136632.2-201ENST00000512891 861 ntBASIC15.19■□□□□ 0.02
ROS1P08922 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.19■□□□□ 0.02
ROS1P08922 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.19■□□□□ 0.02
ROS1P08922 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.19■□□□□ 0.02
ROS1P08922 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.19■□□□□ 0.02
ROS1P08922 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
ROS1P08922 AP000997.3-201ENST00000623333 2250 ntBASIC15.19■□□□□ 0.02
ROS1P08922 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.19■□□□□ 0.02
ROS1P08922 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ROS1P08922 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ROS1P08922 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
ROS1P08922 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ROS1P08922 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ROS1P08922 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms