Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP2P08253 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
MMP2P08253 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.77■□□□□ 0.43
MMP2P08253 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP2P08253 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP2P08253 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.76■□□□□ 0.43
MMP2P08253 AL645608.8-201ENST00000606034 2086 ntBASIC17.76■□□□□ 0.43
MMP2P08253 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP2P08253 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MMP2P08253 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP2P08253 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP2P08253 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP2P08253 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP2P08253 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.76■□□□□ 0.43
MMP2P08253 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.76■□□□□ 0.43
MMP2P08253 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP2P08253 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP2P08253 CLEC4GP1-201ENST00000596555 870 ntBASIC17.76■□□□□ 0.43
MMP2P08253 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.76■□□□□ 0.43
MMP2P08253 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP2P08253 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.76■□□□□ 0.43
MMP2P08253 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP2P08253 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MMP2P08253 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP2P08253 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP2P08253 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP2P08253 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP2P08253 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
MMP2P08253 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP2P08253 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP2P08253 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP2P08253 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
MMP2P08253 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP2P08253 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MMP2P08253 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP2P08253 AC132938.5-201ENST00000624980 1813 ntBASIC17.75■□□□□ 0.43
MMP2P08253 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MMP2P08253 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP2P08253 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 TSPY19P-201ENST00000418461 509 ntBASIC17.75■□□□□ 0.43
MMP2P08253 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP2P08253 TSPY18P-201ENST00000441642 509 ntBASIC17.75■□□□□ 0.43
MMP2P08253 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 KRT16P4-201ENST00000453883 522 ntBASIC17.75■□□□□ 0.43
MMP2P08253 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP2P08253 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.75■□□□□ 0.43
MMP2P08253 STK25P1-201ENST00000585406 838 ntBASIC17.75■□□□□ 0.43
MMP2P08253 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.75■□□□□ 0.43
MMP2P08253 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.75■□□□□ 0.43
MMP2P08253 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.75■□□□□ 0.43
MMP2P08253 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
MMP2P08253 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MMP2P08253 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP2P08253 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP2P08253 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP2P08253 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP2P08253 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP2P08253 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP2P08253 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP2P08253 CROCCP2-202ENST00000412962 2773 ntBASIC17.74■□□□□ 0.43
MMP2P08253 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP2P08253 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP2P08253 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP2P08253 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP2P08253 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP2P08253 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP2P08253 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.74■□□□□ 0.43
MMP2P08253 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MMP2P08253 KRT18P56-201ENST00000507275 550 ntBASIC17.74■□□□□ 0.43
MMP2P08253 IGHV3-52-201ENST00000519770 353 ntBASIC17.74■□□□□ 0.43
MMP2P08253 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.74■□□□□ 0.43
MMP2P08253 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.74■□□□□ 0.43
MMP2P08253 AL591684.3-201ENST00000605187 298 ntBASIC17.74■□□□□ 0.43
MMP2P08253 AP000867.4-201ENST00000641616 219 ntBASIC17.74■□□□□ 0.43
MMP2P08253 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP2P08253 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP2P08253 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MMP2P08253 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MMP2P08253 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP2P08253 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP2P08253 PMPCAP1-201ENST00000508114 1576 ntBASIC17.74■□□□□ 0.43
MMP2P08253 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP2P08253 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
MMP2P08253 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP2P08253 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms