Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPB1P04440 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 HMGA1P5-201ENST00000412453 271 ntBASIC15.9■□□□□ 0.14
HLA-DPB1P04440 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 HLA-J-201ENST00000462773 1622 ntBASIC15.9■□□□□ 0.14
HLA-DPB1P04440 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DPB1P04440 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
HLA-DPB1P04440 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 LINC01126-201ENST00000623515 1646 ntBASIC15.89■□□□□ 0.13
HLA-DPB1P04440 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DPB1P04440 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms