Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MYCNP04198 AL032819.2-201ENST00000624543 2162 ntBASIC20.31■□□□□ 0.84
MYCNP04198 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.3■□□□□ 0.84
MYCNP04198 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MYCNP04198 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 AP005117.1-201ENST00000584346 1413 ntBASIC20.3■□□□□ 0.84
MYCNP04198 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
MYCNP04198 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.3■□□□□ 0.84
MYCNP04198 UPF3AP3-201ENST00000420996 769 ntBASIC20.3■□□□□ 0.84
MYCNP04198 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC20.3■□□□□ 0.84
MYCNP04198 MTCL1P1-201ENST00000446207 792 ntBASIC20.3■□□□□ 0.84
MYCNP04198 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 IGHV3-22-201ENST00000520721 359 ntBASIC20.3■□□□□ 0.84
MYCNP04198 AC012640.2-201ENST00000561606 901 ntBASIC20.3■□□□□ 0.84
MYCNP04198 MIR3687-2-201ENST00000577708 61 ntBASIC20.3■□□□□ 0.84
MYCNP04198 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MYCNP04198 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.3■□□□□ 0.84
MYCNP04198 MIR3687-1-201ENST00000614492 61 ntBASIC20.3■□□□□ 0.84
MYCNP04198 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.3■□□□□ 0.84
MYCNP04198 RFC1-217ENST00000639695 867 ntTSL 5 BASIC20.3■□□□□ 0.84
MYCNP04198 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.3■□□□□ 0.84
MYCNP04198 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.3■□□□□ 0.84
MYCNP04198 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
MYCNP04198 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.3■□□□□ 0.84
MYCNP04198 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MYCNP04198 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MYCNP04198 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.3■□□□□ 0.84
MYCNP04198 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.3■□□□□ 0.84
MYCNP04198 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.3■□□□□ 0.84
MYCNP04198 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.3■□□□□ 0.84
MYCNP04198 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 AC106872.6-201ENST00000514228 1346 ntBASIC20.29■□□□□ 0.84
MYCNP04198 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 INTS4P1-201ENST00000438455 1935 ntBASIC20.29■□□□□ 0.84
MYCNP04198 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
MYCNP04198 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
MYCNP04198 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.29■□□□□ 0.84
MYCNP04198 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.29■□□□□ 0.84
MYCNP04198 RANP7-201ENST00000418085 644 ntBASIC20.29■□□□□ 0.84
MYCNP04198 KRT18P3-201ENST00000451602 1288 ntBASIC20.29■□□□□ 0.84
MYCNP04198 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.29■□□□□ 0.84
MYCNP04198 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC20.29■□□□□ 0.84
MYCNP04198 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.29■□□□□ 0.84
MYCNP04198 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.29■□□□□ 0.84
MYCNP04198 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 AC004918.3-201ENST00000602609 925 ntBASIC20.29■□□□□ 0.84
MYCNP04198 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.29■□□□□ 0.84
MYCNP04198 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
MYCNP04198 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
MYCNP04198 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MYCNP04198 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.29■□□□□ 0.84
MYCNP04198 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MYCNP04198 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
MYCNP04198 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MYCNP04198 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MYCNP04198 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MYCNP04198 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MYCNP04198 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms