Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFAP04085 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.54■□□□□ 0.24
PDGFAP04085 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 UPF3AP3-201ENST00000420996 769 ntBASIC16.54■□□□□ 0.24
PDGFAP04085 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.54■□□□□ 0.24
PDGFAP04085 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.54■□□□□ 0.24
PDGFAP04085 RNA5SP415-201ENST00000517246 115 ntBASIC16.54■□□□□ 0.24
PDGFAP04085 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFAP04085 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.54■□□□□ 0.24
PDGFAP04085 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.54■□□□□ 0.24
PDGFAP04085 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.54■□□□□ 0.24
PDGFAP04085 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFAP04085 HLA-J-201ENST00000462773 1622 ntBASIC16.54■□□□□ 0.24
PDGFAP04085 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PDGFAP04085 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PDGFAP04085 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PDGFAP04085 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFAP04085 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PDGFAP04085 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFAP04085 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
PDGFAP04085 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.53■□□□□ 0.24
PDGFAP04085 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFAP04085 AL356309.3-201ENST00000624132 1934 ntBASIC16.53■□□□□ 0.24
PDGFAP04085 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFAP04085 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PDGFAP04085 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PDGFAP04085 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFAP04085 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.53■□□□□ 0.24
PDGFAP04085 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PDGFAP04085 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.53■□□□□ 0.24
PDGFAP04085 RPSAP43-201ENST00000402237 625 ntBASIC16.53■□□□□ 0.24
PDGFAP04085 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.53■□□□□ 0.24
PDGFAP04085 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PDGFAP04085 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.53■□□□□ 0.24
PDGFAP04085 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.53■□□□□ 0.24
PDGFAP04085 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFAP04085 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.53■□□□□ 0.24
PDGFAP04085 OR7E14P-202ENST00000530490 1290 ntBASIC16.53■□□□□ 0.24
PDGFAP04085 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFAP04085 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFAP04085 Z83851.2-201ENST00000609564 659 ntBASIC16.53■□□□□ 0.24
PDGFAP04085 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.53■□□□□ 0.24
PDGFAP04085 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.53■□□□□ 0.24
PDGFAP04085 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFAP04085 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFAP04085 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFAP04085 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFAP04085 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFAP04085 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.52■□□□□ 0.24
PDGFAP04085 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PDGFAP04085 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PDGFAP04085 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFAP04085 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFAP04085 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFAP04085 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.52■□□□□ 0.24
PDGFAP04085 GPX1P2-201ENST00000429271 606 ntBASIC16.52■□□□□ 0.24
PDGFAP04085 HMGN1P19-201ENST00000436976 333 ntBASIC16.52■□□□□ 0.24
PDGFAP04085 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PDGFAP04085 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.52■□□□□ 0.24
PDGFAP04085 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.52■□□□□ 0.24
PDGFAP04085 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFAP04085 AC083906.6-201ENST00000641366 219 ntBASIC16.52■□□□□ 0.24
PDGFAP04085 AL161938.1-201ENST00000569833 2180 ntBASIC16.52■□□□□ 0.24
PDGFAP04085 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PDGFAP04085 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PDGFAP04085 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDGFAP04085 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.52■□□□□ 0.23
PDGFAP04085 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms