Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
MBD4O95243 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MBD4O95243 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
MBD4O95243 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MBD4O95243 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.07■□□□□ 0.96
MBD4O95243 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MBD4O95243 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.07■□□□□ 0.96
MBD4O95243 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD4O95243 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.06■□□□□ 0.96
MBD4O95243 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
MBD4O95243 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.06■□□□□ 0.96
MBD4O95243 AC005104.2-201ENST00000427818 678 ntBASIC21.06■□□□□ 0.96
MBD4O95243 AC002558.1-201ENST00000488906 803 ntBASIC21.06■□□□□ 0.96
MBD4O95243 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.06■□□□□ 0.96
MBD4O95243 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.06■□□□□ 0.96
MBD4O95243 AC025062.2-201ENST00000605477 670 ntBASIC21.06■□□□□ 0.96
MBD4O95243 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.06■□□□□ 0.96
MBD4O95243 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.06■□□□□ 0.96
MBD4O95243 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
MBD4O95243 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.06■□□□□ 0.96
MBD4O95243 AC148477.5-201ENST00000625164 1645 ntBASIC21.06■□□□□ 0.96
MBD4O95243 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
MBD4O95243 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD4O95243 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.05■□□□□ 0.96
MBD4O95243 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD4O95243 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.05■□□□□ 0.96
MBD4O95243 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD4O95243 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD4O95243 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.05■□□□□ 0.96
MBD4O95243 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
MBD4O95243 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MBD4O95243 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD4O95243 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.05■□□□□ 0.96
MBD4O95243 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MBD4O95243 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
MBD4O95243 KLF4P1-201ENST00000412782 1185 ntBASIC21.05■□□□□ 0.96
MBD4O95243 AC079776.4-201ENST00000511039 504 ntBASIC21.05■□□□□ 0.96
MBD4O95243 IGHV3-52-201ENST00000519770 353 ntBASIC21.05■□□□□ 0.96
MBD4O95243 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
MBD4O95243 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.05■□□□□ 0.96
MBD4O95243 STK25P1-201ENST00000585406 838 ntBASIC21.05■□□□□ 0.96
MBD4O95243 AL049840.3-201ENST00000602669 611 ntBASIC21.05■□□□□ 0.96
MBD4O95243 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MBD4O95243 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD4O95243 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD4O95243 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
MBD4O95243 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.05■□□□□ 0.96
MBD4O95243 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD4O95243 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MBD4O95243 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MBD4O95243 SIGLEC16-201ENST00000599858 1437 ntBASIC21.04■□□□□ 0.96
MBD4O95243 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD4O95243 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MBD4O95243 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MBD4O95243 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MBD4O95243 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MBD4O95243 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.04■□□□□ 0.96
MBD4O95243 AL031284.1-201ENST00000419297 478 ntBASIC21.04■□□□□ 0.96
MBD4O95243 RPS2P1-201ENST00000434010 821 ntBASIC21.04■□□□□ 0.96
MBD4O95243 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.04■□□□□ 0.96
MBD4O95243 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.04■□□□□ 0.96
MBD4O95243 MTDHP4-201ENST00000600287 670 ntBASIC21.04■□□□□ 0.96
MBD4O95243 AC064862.7-201ENST00000604520 867 ntBASIC21.04■□□□□ 0.96
MBD4O95243 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
MBD4O95243 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD4O95243 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD4O95243 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MBD4O95243 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD4O95243 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.04■□□□□ 0.96
MBD4O95243 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
MBD4O95243 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.04■□□□□ 0.96
MBD4O95243 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MBD4O95243 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD4O95243 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.04■□□□□ 0.96
MBD4O95243 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD4O95243 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MBD4O95243 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
MBD4O95243 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
MBD4O95243 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MBD4O95243 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MBD4O95243 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD4O95243 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms