Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRAMEF4O60810 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.99■□□□□ 0.31
PRAMEF4O60810 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 ARMC10P1-201ENST00000313754 855 ntBASIC16.98■□□□□ 0.31
PRAMEF4O60810 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 AL023806.1-201ENST00000603994 1649 ntBASIC16.98■□□□□ 0.31
PRAMEF4O60810 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRAMEF4O60810 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PRAMEF4O60810 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF4O60810 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF4O60810 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF4O60810 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 AP001094.4-201ENST00000579008 2176 ntBASIC16.97■□□□□ 0.31
PRAMEF4O60810 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF4O60810 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF4O60810 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 TOB2P1-201ENST00000469761 992 ntBASIC16.97■□□□□ 0.31
PRAMEF4O60810 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF4O60810 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF4O60810 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 AL049757.1-201ENST00000616842 1596 ntBASIC16.97■□□□□ 0.31
PRAMEF4O60810 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF4O60810 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEF4O60810 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF4O60810 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF4O60810 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF4O60810 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms