Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCN1O60741 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.55■□□□□ 0.24
HCN1O60741 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HCN1O60741 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HCN1O60741 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.55■□□□□ 0.24
HCN1O60741 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HCN1O60741 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.55■□□□□ 0.24
HCN1O60741 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.55■□□□□ 0.24
HCN1O60741 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.55■□□□□ 0.24
HCN1O60741 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.55■□□□□ 0.24
HCN1O60741 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.55■□□□□ 0.24
HCN1O60741 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.55■□□□□ 0.24
HCN1O60741 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.55■□□□□ 0.24
HCN1O60741 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 AL691432.3-201ENST00000621860 400 ntBASIC16.55■□□□□ 0.24
HCN1O60741 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
HCN1O60741 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.55■□□□□ 0.24
HCN1O60741 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.55■□□□□ 0.24
HCN1O60741 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCN1O60741 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.54■□□□□ 0.24
HCN1O60741 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.54■□□□□ 0.24
HCN1O60741 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.54■□□□□ 0.24
HCN1O60741 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.54■□□□□ 0.24
HCN1O60741 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.54■□□□□ 0.24
HCN1O60741 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.54■□□□□ 0.24
HCN1O60741 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.54■□□□□ 0.24
HCN1O60741 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.54■□□□□ 0.24
HCN1O60741 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.54■□□□□ 0.24
HCN1O60741 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.54■□□□□ 0.24
HCN1O60741 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.54■□□□□ 0.24
HCN1O60741 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.54■□□□□ 0.24
HCN1O60741 PRELID1P1-202ENST00000567272 903 ntBASIC16.54■□□□□ 0.24
HCN1O60741 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.54■□□□□ 0.24
HCN1O60741 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.54■□□□□ 0.24
HCN1O60741 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 TNRC18P3-201ENST00000441896 2691 ntBASIC16.54■□□□□ 0.24
HCN1O60741 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.54■□□□□ 0.24
HCN1O60741 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.54■□□□□ 0.24
HCN1O60741 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.54■□□□□ 0.24
HCN1O60741 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.54■□□□□ 0.24
HCN1O60741 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCN1O60741 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.53■□□□□ 0.24
HCN1O60741 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.53■□□□□ 0.24
HCN1O60741 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.53■□□□□ 0.24
HCN1O60741 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HCN1O60741 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCN1O60741 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.53■□□□□ 0.24
HCN1O60741 NUS1P1-201ENST00000446295 882 ntBASIC16.53■□□□□ 0.24
HCN1O60741 GUSBP12-201ENST00000513727 720 ntBASIC16.53■□□□□ 0.24
HCN1O60741 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.53■□□□□ 0.24
HCN1O60741 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.53■□□□□ 0.24
HCN1O60741 IGHV3-41-201ENST00000613121 348 ntBASIC16.53■□□□□ 0.24
HCN1O60741 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms