Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CYTH3O43739 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CYTH3O43739 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CYTH3O43739 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.28■□□□□ 0.84
CYTH3O43739 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CYTH3O43739 HLA-J-201ENST00000462773 1622 ntBASIC20.28■□□□□ 0.84
CYTH3O43739 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CYTH3O43739 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CYTH3O43739 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CYTH3O43739 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYTH3O43739 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYTH3O43739 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYTH3O43739 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYTH3O43739 KRT18P67-201ENST00000432816 1264 ntBASIC20.28■□□□□ 0.84
CYTH3O43739 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CYTH3O43739 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CYTH3O43739 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.28■□□□□ 0.84
CYTH3O43739 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
CYTH3O43739 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.28■□□□□ 0.84
CYTH3O43739 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.28■□□□□ 0.84
CYTH3O43739 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.28■□□□□ 0.84
CYTH3O43739 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CYTH3O43739 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYTH3O43739 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
CYTH3O43739 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYTH3O43739 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYTH3O43739 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYTH3O43739 AC133963.1-201ENST00000504166 1679 ntBASIC20.28■□□□□ 0.84
CYTH3O43739 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CYTH3O43739 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.28■□□□□ 0.84
CYTH3O43739 HLA-A-201ENST00000376802 1334 ntBASIC20.27■□□□□ 0.84
CYTH3O43739 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CYTH3O43739 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.27■□□□□ 0.84
CYTH3O43739 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYTH3O43739 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.27■□□□□ 0.84
CYTH3O43739 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CYTH3O43739 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYTH3O43739 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CYTH3O43739 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYTH3O43739 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CYTH3O43739 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CYTH3O43739 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYTH3O43739 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CYTH3O43739 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.27■□□□□ 0.84
CYTH3O43739 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.27■□□□□ 0.84
CYTH3O43739 IGHV3-52-201ENST00000519770 353 ntBASIC20.27■□□□□ 0.84
CYTH3O43739 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.27■□□□□ 0.84
CYTH3O43739 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.27■□□□□ 0.84
CYTH3O43739 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.27■□□□□ 0.84
CYTH3O43739 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.27■□□□□ 0.84
CYTH3O43739 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.27■□□□□ 0.84
CYTH3O43739 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.27■□□□□ 0.84
CYTH3O43739 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CYTH3O43739 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CYTH3O43739 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CYTH3O43739 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CYTH3O43739 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.27■□□□□ 0.83
CYTH3O43739 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CYTH3O43739 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.26■□□□□ 0.83
CYTH3O43739 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
CYTH3O43739 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.26■□□□□ 0.83
CYTH3O43739 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 AC003669.1-201ENST00000334569 611 ntBASIC20.26■□□□□ 0.83
CYTH3O43739 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.26■□□□□ 0.83
CYTH3O43739 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.26■□□□□ 0.83
CYTH3O43739 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CYTH3O43739 KLF4P1-201ENST00000412782 1185 ntBASIC20.26■□□□□ 0.83
CYTH3O43739 SCARNA2-201ENST00000458748 420 ntBASIC20.26■□□□□ 0.83
CYTH3O43739 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.26■□□□□ 0.83
CYTH3O43739 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.26■□□□□ 0.83
CYTH3O43739 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CYTH3O43739 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CYTH3O43739 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.26■□□□□ 0.83
CYTH3O43739 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.26■□□□□ 0.83
CYTH3O43739 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CYTH3O43739 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.26■□□□□ 0.83
CYTH3O43739 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.26■□□□□ 0.83
CYTH3O43739 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.25■□□□□ 0.83
CYTH3O43739 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.25■□□□□ 0.83
CYTH3O43739 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CYTH3O43739 AC009336.1-201ENST00000608941 1553 ntBASIC20.25■□□□□ 0.83
CYTH3O43739 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CYTH3O43739 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.25■□□□□ 0.83
CYTH3O43739 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.25■□□□□ 0.83
CYTH3O43739 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CYTH3O43739 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CYTH3O43739 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.25■□□□□ 0.83
CYTH3O43739 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CYTH3O43739 GNAS-203ENST00000306120 1878 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms