Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 AC116407.2-201ENST00000613639 860 ntBASIC15.69■□□□□ 0.1
SGCEO43556 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.69■□□□□ 0.1
SGCEO43556 AL353692.3-201ENST00000407031 1396 ntBASIC15.69■□□□□ 0.1
SGCEO43556 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SGCEO43556 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.68■□□□□ 0.1
SGCEO43556 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.68■□□□□ 0.1
SGCEO43556 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.68■□□□□ 0.1
SGCEO43556 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SGCEO43556 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.68■□□□□ 0.1
SGCEO43556 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SGCEO43556 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.68■□□□□ 0.1
SGCEO43556 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SGCEO43556 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.68■□□□□ 0.1
SGCEO43556 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.68■□□□□ 0.1
SGCEO43556 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.68■□□□□ 0.1
SGCEO43556 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.68■□□□□ 0.1
SGCEO43556 AL049597.2-201ENST00000565575 961 ntBASIC15.68■□□□□ 0.1
SGCEO43556 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.68■□□□□ 0.1
SGCEO43556 AC005332.3-201ENST00000589904 676 ntBASIC15.68■□□□□ 0.1
SGCEO43556 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SGCEO43556 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.68■□□□□ 0.1
SGCEO43556 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SGCEO43556 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.68■□□□□ 0.1
SGCEO43556 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.68■□□□□ 0.1
SGCEO43556 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SGCEO43556 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.68■□□□□ 0.1
SGCEO43556 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SGCEO43556 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.68■□□□□ 0.1
SGCEO43556 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
SGCEO43556 AC068418.2-201ENST00000577309 3703 ntBASIC15.67■□□□□ 0.1
SGCEO43556 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 AC006116.8-202ENST00000587620 1550 ntBASIC15.67■□□□□ 0.1
SGCEO43556 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.67■□□□□ 0.1
SGCEO43556 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SGCEO43556 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SGCEO43556 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SGCEO43556 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.67■□□□□ 0.1
SGCEO43556 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.67■□□□□ 0.1
SGCEO43556 AL645929.1-201ENST00000420084 975 ntBASIC15.67■□□□□ 0.1
SGCEO43556 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.67■□□□□ 0.1
SGCEO43556 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.67■□□□□ 0.1
SGCEO43556 FAM210CP-201ENST00000445714 574 ntBASIC15.67■□□□□ 0.1
SGCEO43556 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.67■□□□□ 0.1
SGCEO43556 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SGCEO43556 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.67■□□□□ 0.1
SGCEO43556 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.67■□□□□ 0.1
SGCEO43556 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SGCEO43556 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SGCEO43556 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SGCEO43556 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.66■□□□□ 0.1
SGCEO43556 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.66■□□□□ 0.1
SGCEO43556 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 NFIC-211ENST00000641145 8399 ntBASIC15.66■□□□□ 0.1
SGCEO43556 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SGCEO43556 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
SGCEO43556 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SGCEO43556 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms