Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RIPK2O43353 PVRIG2P-201ENST00000435460 978 ntBASIC17.96■□□□□ 0.47
RIPK2O43353 KRT18P65-201ENST00000439811 1286 ntBASIC17.96■□□□□ 0.47
RIPK2O43353 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.96■□□□□ 0.47
RIPK2O43353 AC233702.5-201ENST00000584107 538 ntBASIC17.96■□□□□ 0.47
RIPK2O43353 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.96■□□□□ 0.47
RIPK2O43353 AP001412.1-201ENST00000608405 714 ntBASIC17.96■□□□□ 0.47
RIPK2O43353 AC116562.4-202ENST00000641738 218 ntBASIC17.96■□□□□ 0.47
RIPK2O43353 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.96■□□□□ 0.47
RIPK2O43353 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RIPK2O43353 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIPK2O43353 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RIPK2O43353 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RIPK2O43353 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RIPK2O43353 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
RIPK2O43353 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RIPK2O43353 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RIPK2O43353 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
RIPK2O43353 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.95■□□□□ 0.46
RIPK2O43353 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 AC012618.2-201ENST00000428058 849 ntBASIC17.95■□□□□ 0.46
RIPK2O43353 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.95■□□□□ 0.46
RIPK2O43353 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.95■□□□□ 0.46
RIPK2O43353 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.95■□□□□ 0.46
RIPK2O43353 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.95■□□□□ 0.46
RIPK2O43353 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIPK2O43353 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RIPK2O43353 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RIPK2O43353 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RIPK2O43353 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 RBM17P1-201ENST00000453646 1190 ntBASIC17.94■□□□□ 0.46
RIPK2O43353 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 CD99P1-205ENST00000527459 561 ntBASIC17.94■□□□□ 0.46
RIPK2O43353 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.94■□□□□ 0.46
RIPK2O43353 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.94■□□□□ 0.46
RIPK2O43353 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 AC010653.2-201ENST00000623505 997 ntBASIC17.94■□□□□ 0.46
RIPK2O43353 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
RIPK2O43353 CICP6-201ENST00000457191 2729 ntBASIC17.94■□□□□ 0.46
RIPK2O43353 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.94■□□□□ 0.46
RIPK2O43353 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIPK2O43353 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RIPK2O43353 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RIPK2O43353 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms