Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXN1O15353 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
FOXN1O15353 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.06■□□□□ 0.96
FOXN1O15353 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
FOXN1O15353 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
FOXN1O15353 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
FOXN1O15353 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
FOXN1O15353 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
FOXN1O15353 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
FOXN1O15353 RNA5SP421-201ENST00000516864 134 ntBASIC21.06■□□□□ 0.96
FOXN1O15353 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.06■□□□□ 0.96
FOXN1O15353 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
FOXN1O15353 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
FOXN1O15353 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 GPR89P-201ENST00000407924 1495 ntBASIC21.06■□□□□ 0.96
FOXN1O15353 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXN1O15353 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXN1O15353 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXN1O15353 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.05■□□□□ 0.96
FOXN1O15353 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN1O15353 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN1O15353 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN1O15353 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN1O15353 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXN1O15353 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN1O15353 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXN1O15353 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXN1O15353 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN1O15353 AC236430.1-201ENST00000402231 743 ntBASIC21.05■□□□□ 0.96
FOXN1O15353 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.05■□□□□ 0.96
FOXN1O15353 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXN1O15353 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.05■□□□□ 0.96
FOXN1O15353 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXN1O15353 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.05■□□□□ 0.96
FOXN1O15353 TERF1P3-201ENST00000505638 1227 ntBASIC21.05■□□□□ 0.96
FOXN1O15353 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN1O15353 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXN1O15353 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN1O15353 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXN1O15353 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXN1O15353 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN1O15353 AL357033.4-201ENST00000617703 1807 ntBASIC21.05■□□□□ 0.96
FOXN1O15353 AC073592.3-201ENST00000625118 1834 ntBASIC21.05■□□□□ 0.96
FOXN1O15353 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN1O15353 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.05■□□□□ 0.96
FOXN1O15353 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
FOXN1O15353 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN1O15353 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
FOXN1O15353 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXN1O15353 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.04■□□□□ 0.96
FOXN1O15353 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
FOXN1O15353 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
FOXN1O15353 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXN1O15353 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXN1O15353 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.04■□□□□ 0.96
FOXN1O15353 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXN1O15353 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
FOXN1O15353 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXN1O15353 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.04■□□□□ 0.96
FOXN1O15353 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.04■□□□□ 0.96
FOXN1O15353 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.04■□□□□ 0.96
FOXN1O15353 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.04■□□□□ 0.96
FOXN1O15353 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXN1O15353 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
FOXN1O15353 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
FOXN1O15353 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
FOXN1O15353 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.04■□□□□ 0.96
FOXN1O15353 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
FOXN1O15353 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.04■□□□□ 0.96
FOXN1O15353 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN1O15353 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms