Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PITPNM1O00562 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PITPNM1O00562 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC19.25■□□□□ 0.67
PITPNM1O00562 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
PITPNM1O00562 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PITPNM1O00562 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PITPNM1O00562 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.25■□□□□ 0.67
PITPNM1O00562 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PITPNM1O00562 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PITPNM1O00562 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PITPNM1O00562 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PITPNM1O00562 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PITPNM1O00562 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PITPNM1O00562 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.25■□□□□ 0.67
PITPNM1O00562 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PITPNM1O00562 AP002414.1-201ENST00000391405 1147 ntBASIC19.25■□□□□ 0.67
PITPNM1O00562 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.25■□□□□ 0.67
PITPNM1O00562 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.25■□□□□ 0.67
PITPNM1O00562 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC19.25■□□□□ 0.67
PITPNM1O00562 ACTG1P14-201ENST00000446382 1122 ntBASIC19.25■□□□□ 0.67
PITPNM1O00562 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PITPNM1O00562 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.25■□□□□ 0.67
PITPNM1O00562 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.25■□□□□ 0.67
PITPNM1O00562 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.25■□□□□ 0.67
PITPNM1O00562 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC19.25■□□□□ 0.67
PITPNM1O00562 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PITPNM1O00562 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.25■□□□□ 0.67
PITPNM1O00562 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC19.25■□□□□ 0.67
PITPNM1O00562 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.25■□□□□ 0.67
PITPNM1O00562 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.25■□□□□ 0.67
PITPNM1O00562 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
PITPNM1O00562 GGTLC5P-201ENST00000617623 998 ntBASIC19.25■□□□□ 0.67
PITPNM1O00562 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.25■□□□□ 0.67
PITPNM1O00562 AC010507.1-201ENST00000633895 436 ntBASIC19.25■□□□□ 0.67
PITPNM1O00562 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC19.25■□□□□ 0.67
PITPNM1O00562 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.25■□□□□ 0.67
PITPNM1O00562 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PITPNM1O00562 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.25■□□□□ 0.67
PITPNM1O00562 MTCO1P15-201ENST00000529569 1526 ntBASIC19.25■□□□□ 0.67
PITPNM1O00562 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.25■□□□□ 0.67
PITPNM1O00562 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.24■□□□□ 0.67
PITPNM1O00562 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.24■□□□□ 0.67
PITPNM1O00562 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.24■□□□□ 0.67
PITPNM1O00562 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 AC013410.2-201ENST00000422627 201 ntBASIC19.24■□□□□ 0.67
PITPNM1O00562 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC19.24■□□□□ 0.67
PITPNM1O00562 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.24■□□□□ 0.67
PITPNM1O00562 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.24■□□□□ 0.67
PITPNM1O00562 RHOQP3-201ENST00000437982 621 ntBASIC19.24■□□□□ 0.67
PITPNM1O00562 MTCO2P3-201ENST00000442543 421 ntBASIC19.24■□□□□ 0.67
PITPNM1O00562 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC19.24■□□□□ 0.67
PITPNM1O00562 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.24■□□□□ 0.67
PITPNM1O00562 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.24■□□□□ 0.67
PITPNM1O00562 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PITPNM1O00562 AC024933.1-201ENST00000608472 348 ntBASIC19.24■□□□□ 0.67
PITPNM1O00562 AC004877.2-201ENST00000623941 599 ntBASIC19.24■□□□□ 0.67
PITPNM1O00562 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.24■□□□□ 0.67
PITPNM1O00562 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.24■□□□□ 0.67
PITPNM1O00562 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.24■□□□□ 0.67
PITPNM1O00562 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PITPNM1O00562 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.24■□□□□ 0.67
PITPNM1O00562 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PITPNM1O00562 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 AC073592.3-201ENST00000625118 1834 ntBASIC19.23■□□□□ 0.67
PITPNM1O00562 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.23■□□□□ 0.67
PITPNM1O00562 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 AC093534.1-201ENST00000504977 132 ntBASIC19.23■□□□□ 0.67
PITPNM1O00562 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.23■□□□□ 0.67
PITPNM1O00562 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.23■□□□□ 0.67
PITPNM1O00562 KRT19P2-202ENST00000557173 1012 ntBASIC19.23■□□□□ 0.67
PITPNM1O00562 AC009268.1-201ENST00000561352 1203 ntBASIC19.23■□□□□ 0.67
PITPNM1O00562 AL031432.2-201ENST00000566714 459 ntBASIC19.23■□□□□ 0.67
PITPNM1O00562 AL928711.1-201ENST00000570165 459 ntBASIC19.23■□□□□ 0.67
PITPNM1O00562 STK25P1-201ENST00000585406 838 ntBASIC19.23■□□□□ 0.67
PITPNM1O00562 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PITPNM1O00562 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.23■□□□□ 0.67
PITPNM1O00562 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PITPNM1O00562 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PITPNM1O00562 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms