Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDC7O00311 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC7O00311 AL136038.3-201ENST00000561909 1096 ntBASIC17.35■□□□□ 0.37
CDC7O00311 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC7O00311 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.35■□□□□ 0.37
CDC7O00311 AC011498.5-201ENST00000592027 486 ntBASIC17.35■□□□□ 0.37
CDC7O00311 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDC7O00311 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
CDC7O00311 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC7O00311 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC7O00311 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC7O00311 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC7O00311 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC7O00311 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC7O00311 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDC7O00311 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC7O00311 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDC7O00311 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.34■□□□□ 0.37
CDC7O00311 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.34■□□□□ 0.37
CDC7O00311 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 RN7SL606P-201ENST00000472779 293 ntBASIC17.34■□□□□ 0.37
CDC7O00311 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.34■□□□□ 0.37
CDC7O00311 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.34■□□□□ 0.37
CDC7O00311 GUSBP12-201ENST00000513727 720 ntBASIC17.34■□□□□ 0.37
CDC7O00311 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CDC7O00311 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.34■□□□□ 0.37
CDC7O00311 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDC7O00311 AC124864.1-201ENST00000623408 392 ntBASIC17.34■□□□□ 0.37
CDC7O00311 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 OR6D1P-202ENST00000641007 5290 ntBASIC17.34■□□□□ 0.37
CDC7O00311 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC7O00311 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC7O00311 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDC7O00311 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CDC7O00311 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CDC7O00311 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDC7O00311 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CDC7O00311 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC7O00311 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC7O00311 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC7O00311 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC7O00311 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.33■□□□□ 0.37
CDC7O00311 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.33■□□□□ 0.37
CDC7O00311 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDC7O00311 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC7O00311 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CDC7O00311 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.33■□□□□ 0.37
CDC7O00311 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
CDC7O00311 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 AC005104.2-201ENST00000427818 678 ntBASIC17.33■□□□□ 0.36
CDC7O00311 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 AL049597.2-201ENST00000565575 961 ntBASIC17.33■□□□□ 0.36
CDC7O00311 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.33■□□□□ 0.36
CDC7O00311 NTF6B-201ENST00000591913 560 ntBASIC17.33■□□□□ 0.36
CDC7O00311 AL592071.1-201ENST00000611956 408 ntBASIC17.33■□□□□ 0.36
CDC7O00311 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.33■□□□□ 0.36
CDC7O00311 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.33■□□□□ 0.36
CDC7O00311 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.33■□□□□ 0.36
CDC7O00311 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 AP001094.4-201ENST00000579008 2176 ntBASIC17.33■□□□□ 0.36
CDC7O00311 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 LYSMD4-203ENST00000378904 2122 ntBASIC17.33■□□□□ 0.36
CDC7O00311 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.33■□□□□ 0.36
CDC7O00311 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CDC7O00311 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.33■□□□□ 0.36
CDC7O00311 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDC7O00311 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.32■□□□□ 0.36
CDC7O00311 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDC7O00311 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDC7O00311 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC7O00311 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDC7O00311 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms