Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SBNO1A3KN83 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SBNO1A3KN83 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 FAM185BP-201ENST00000443595 716 ntBASIC23.75■■□□□ 1.39
SBNO1A3KN83 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SBNO1A3KN83 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SBNO1A3KN83 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SBNO1A3KN83 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 BX276092.7-203ENST00000637198 1536 ntBASIC23.75■■□□□ 1.39
SBNO1A3KN83 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SBNO1A3KN83 HARS-201ENST00000307633 1780 ntTSL 2 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 AP000974.1-201ENST00000623909 2387 ntBASIC23.75■■□□□ 1.39
SBNO1A3KN83 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.74■■□□□ 1.39
SBNO1A3KN83 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SBNO1A3KN83 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
SBNO1A3KN83 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 COPE-202ENST00000349893 948 ntTSL 2 BASIC23.74■■□□□ 1.39
SBNO1A3KN83 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 ACTG1P4-201ENST00000425123 1122 ntBASIC23.74■■□□□ 1.39
SBNO1A3KN83 AC067863.1-201ENST00000494933 530 ntBASIC23.74■■□□□ 1.39
SBNO1A3KN83 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC23.74■■□□□ 1.39
SBNO1A3KN83 AC112191.1-201ENST00000523689 701 ntBASIC23.74■■□□□ 1.39
SBNO1A3KN83 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC23.74■■□□□ 1.39
SBNO1A3KN83 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC23.74■■□□□ 1.39
SBNO1A3KN83 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
SBNO1A3KN83 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SBNO1A3KN83 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.74■■□□□ 1.39
SBNO1A3KN83 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SBNO1A3KN83 AL590787.1-201ENST00000568856 1315 ntBASIC23.73■■□□□ 1.39
SBNO1A3KN83 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.73■■□□□ 1.39
SBNO1A3KN83 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SBNO1A3KN83 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SBNO1A3KN83 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SBNO1A3KN83 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
SBNO1A3KN83 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SBNO1A3KN83 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
SBNO1A3KN83 AC002558.1-201ENST00000488906 803 ntBASIC23.73■■□□□ 1.39
SBNO1A3KN83 IGHV3-52-201ENST00000519770 353 ntBASIC23.73■■□□□ 1.39
SBNO1A3KN83 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC23.73■■□□□ 1.39
SBNO1A3KN83 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC23.73■■□□□ 1.39
SBNO1A3KN83 AC190387.1-201ENST00000551683 408 ntBASIC23.73■■□□□ 1.39
SBNO1A3KN83 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC23.73■■□□□ 1.39
SBNO1A3KN83 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC23.73■■□□□ 1.39
SBNO1A3KN83 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SBNO1A3KN83 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC23.73■■□□□ 1.39
SBNO1A3KN83 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC23.73■■□□□ 1.39
SBNO1A3KN83 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SBNO1A3KN83 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SBNO1A3KN83 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SBNO1A3KN83 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC23.72■■□□□ 1.39
SBNO1A3KN83 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 FALEC-201ENST00000416894 566 ntTSL 3 BASIC23.72■■□□□ 1.39
SBNO1A3KN83 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC23.72■■□□□ 1.39
SBNO1A3KN83 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC23.72■■□□□ 1.39
SBNO1A3KN83 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC23.72■■□□□ 1.39
SBNO1A3KN83 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.72■■□□□ 1.39
SBNO1A3KN83 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.72■■□□□ 1.39
SBNO1A3KN83 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.72■■□□□ 1.39
SBNO1A3KN83 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC23.72■■□□□ 1.39
SBNO1A3KN83 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SBNO1A3KN83 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SBNO1A3KN83 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC23.71■■□□□ 1.39
SBNO1A3KN83 PI4KAP1-204ENST00000612579 1703 ntBASIC23.71■■□□□ 1.39
SBNO1A3KN83 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SBNO1A3KN83 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms