Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 PRELID1P1-202ENST00000567272 903 ntBASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC073592.5-201ENST00000624854 528 ntBASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC012313.10-201ENST00000623509 926 ntBASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC016396.2-201ENST00000562575 1417 ntBASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC009336.1-201ENST00000608941 1553 ntBASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV5-4A0A0C4DH59 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC132008.2-207ENST00000454517 770 ntBASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC106795.1-205ENST00000512851 1056 ntBASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AP001269.4-201ENST00000609611 512 ntBASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AL732292.2-201ENST00000609649 430 ntBASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC073592.4-201ENST00000623827 446 ntBASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC141586.5-201ENST00000624546 2050 ntBASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC026471.1-201ENST00000564629 3026 ntBASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 CROCCP2-202ENST00000412962 2773 ntBASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-4A0A0C4DH59 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms